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| author |   Horea Christian <horea.christ@yandex.com> | 2018-05-23 02:24:36 +0200 |
|---|---|---|
| committer | Horea Christian <horea.christ@yandex.com> | 2018-05-23 02:24:36 +0200 |
| commit | 8c25ca238bd0d2df7e204f6506d7258a6cdf1615 (patch) | |
| tree | c975317ca17c313eca6308594125df9e0d53670c | |
| parent | dev-python/num2words: new package (pybids dep) (diff) | |
| download | sci-master.zip sci-master.tar.gz sci-master.tar.bz2 | |
Package-Manager: Portage-2.3.38, Repoman-2.3.9
| -rw-r--r-- | sci-libs/pybids/Manifest | 1 | ||||
| -rw-r--r-- | sci-libs/pybids/metadata.xml | 20 | ||||
| -rw-r--r-- | sci-libs/pybids/pybids-0.5.0.ebuild | 34 | ||||
| -rw-r--r-- | sci-libs/pybids/pybids-9999.ebuild | 37 |
4 files changed, 92 insertions, 0 deletions
diff --git a/sci-libs/pybids/Manifest b/sci-libs/pybids/Manifest new file mode 100644 index 0000000..e3e63b7 --- /dev/null +++ b/sci-libs/pybids/Manifest @@ -0,0 +1 @@ +DIST pybids-0.5.0.tar.gz 2814050 BLAKE2B b4bd548989d09e6f49d94c9262fb225a25a37bd5797fe33d2296943808a8dbebeaf17b81e4ea0513c620bcf4c4b4cbae394123fabe7244363205c73328f00e8b SHA512 7d39198fa321535a2f1761348069c18e7ba113174b8d034dd20e5ea3ac11013840da89b5b7bbe6d9b0458c46a5bc07200a97c5efa1a6ff716c524390bd0a3a65 diff --git a/sci-libs/pybids/metadata.xml b/sci-libs/pybids/metadata.xml new file mode 100644 index 0000000..143b3ea --- /dev/null +++ b/sci-libs/pybids/metadata.xml @@ -0,0 +1,20 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> + PyBIDS is a Python library to centralize interactions with datasets + conforming BIDS (Brain Imaging Data Structure) format. For more + information about BIDS visit http://bids.neuroimaging.io. + </longdescription> + <upstream> + <remote-id type="github">INCF/pybids</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-libs/pybids/pybids-0.5.0.ebuild b/sci-libs/pybids/pybids-0.5.0.ebuild new file mode 100644 index 0000000..2a2ecf2 --- /dev/null +++ b/sci-libs/pybids/pybids-0.5.0.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) + +inherit distutils-r1 + +DESCRIPTION="Python package to access BIDS datasets" +HOMEPAGE="https://github.com/INCF/pybids" +SRC_URI="https://github.com/INCF/pybids/archive/${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + " +RDEPEND=" + dev-python/grabbit[${PYTHON_USEDEP}] + dev-python/num2words[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/patsy[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}] + sci-libs/nibabel[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] + " + +# Tests are broken: https://github.com/INCF/pybids/issues/138 +RESTRICT="test" diff --git a/sci-libs/pybids/pybids-9999.ebuild b/sci-libs/pybids/pybids-9999.ebuild new file mode 100644 index 0000000..397820d --- /dev/null +++ b/sci-libs/pybids/pybids-9999.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) + +inherit distutils-r1 git-r3 + +DESCRIPTION="Python package to access BIDS datasets" +HOMEPAGE="https://github.com/INCF/pybids" +SRC_URI="" +EGIT_REPO_URI="https://github.com/INCF/pybids" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="test" + +DEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + test? ( dev-python/pytest[${PYTHON_USEDEP}] ) + " +RDEPEND=" + dev-python/grabbit[${PYTHON_USEDEP}] + dev-python/num2words[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/patsy[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}] + sci-libs/nibabel[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] + " + +python_test() { + py.test -v || die +} |