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authorAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-03-20 11:29:16 +0100
committerAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-03-20 11:29:16 +0100
commit094e637f0659cbd3e5b42538d3e6ce7caee32913 (patch)
tree5b745440ffd046b169014d68c88df07e148a1d68
parentsci-biology/autoeditor: remove masked package (diff)
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sci-biology/dna2pep: remove masked package
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
-rw-r--r--profiles/package.mask5
-rw-r--r--sci-biology/dna2pep/Manifest1
-rw-r--r--sci-biology/dna2pep/dna2pep-1.1.ebuild27
-rw-r--r--sci-biology/dna2pep/metadata.xml12
4 files changed, 0 insertions, 45 deletions
diff --git a/profiles/package.mask b/profiles/package.mask
index dbd59dd0c..639f77fa7 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -31,11 +31,6 @@
#--- END OF EXAMPLES ---
# Andrew Ammerlaan <andrewammerlaan@riseup.net> (06 March 2021)
-# Python2 only
-# Masked for removal in 14 days, if you need this please complain
-sci-biology/dna2pep
-
-# Andrew Ammerlaan <andrewammerlaan@riseup.net> (06 March 2021)
# missing dependency cplex (nonfree IBM thingy)
# Masked for removal in 14 days, if you need this please complain
sci-biology/grass
diff --git a/sci-biology/dna2pep/Manifest b/sci-biology/dna2pep/Manifest
deleted file mode 100644
index 9f8f4cf84..000000000
--- a/sci-biology/dna2pep/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST dna2pep-1.1.tgz 13340 BLAKE2B 4a0096ac980b6950d7109bc469abae212953bbf9750b0eac97ef309493373d2ac25c231936b37a9dc2c8b23bad8be9d1fc800bc17437b943179c17eef41669dc SHA512 22016dafd190a9d72b8ba25fd42b96c2cf44f4aebba7b3c89ba86e543a4bffaca0e34581b79b31e4e0c48492911925e7740a0c60faf361fb52779c361c4f08db
diff --git a/sci-biology/dna2pep/dna2pep-1.1.ebuild b/sci-biology/dna2pep/dna2pep-1.1.ebuild
deleted file mode 100644
index 91aed370b..000000000
--- a/sci-biology/dna2pep/dna2pep-1.1.ebuild
+++ /dev/null
@@ -1,27 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Translate DNA sequence into protein (with STOP codon read-through)"
-HOMEPAGE="http://www.cbs.dtu.dk/services/VirtualRibosome/download.php"
-SRC_URI="http://www.cbs.dtu.dk/services/VirtualRibosome/releases/${P}.tgz"
-
-# source code does not explictly mention GPL version so I assume GPL-1
-LICENSE="GPL-1"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-src_prepare(){
- sed -e 's@#!/usr/local/python/bin/python@#! /usr/bin/env python@' -i *.py || die
-}
-
-src_install(){
- dobin *.py
- insinto /usr/share/"${PN}"/
- doins mtx/gcMitVertebrate.mtx
-}
diff --git a/sci-biology/dna2pep/metadata.xml b/sci-biology/dna2pep/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/dna2pep/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
-</pkgmetadata>