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authorJustin Lecher (jlec) <jlec@j-schmitz.net>2010-02-06 00:22:40 +0100
committerJustin Lecher (jlec) <jlec@j-schmitz.net>2010-02-07 00:55:37 +0100
commit2c50f3e905a81013108389a77a68c51ec14fce90 (patch)
tree325326f81a74a3b552f45bee9c48dda070a25f58
parentsci-chemistry/gromacs-4.0.7-r1: InCvs (diff)
downloadsci-2c50f3e905a81013108389a77a68c51ec14fce90.tar.gz
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sci-2c50f3e905a81013108389a77a68c51ec14fce90.zip
InCvs
-rw-r--r--sci-libs/balbes-db/ChangeLog54
-rw-r--r--sci-libs/balbes-db/Manifest19
-rw-r--r--sci-libs/balbes-db/balbes-db-6.1.1-r3.ebuild40
-rw-r--r--sci-libs/balbes-db/balbes-db-6.1.2-r1.ebuild50
-rw-r--r--sci-libs/balbes-db/balbes-db-6.1.2.ebuild44
-rw-r--r--sci-libs/balbes-db/balbes-db-6.1.3.ebuild50
-rw-r--r--sci-libs/balbes-db/metadata.xml8
7 files changed, 0 insertions, 265 deletions
diff --git a/sci-libs/balbes-db/ChangeLog b/sci-libs/balbes-db/ChangeLog
deleted file mode 100644
index ef9a7397b..000000000
--- a/sci-libs/balbes-db/ChangeLog
+++ /dev/null
@@ -1,54 +0,0 @@
-# ChangeLog for sci-libs/balbes-db
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
-*balbes-db-6.1.3 (22 Dec 2009)
-
- 22 Dec 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- +balbes-db-6.1.3.ebuild:
- Version bump
-
-*balbes-db-6.1.2-r1 (22 Nov 2009)
-
- 22 Nov 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- +balbes-db-6.1.2-r1.ebuild:
- set env BALBES_ROOT
-
- 26 Aug 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- balbes-db-6.1.2.ebuild:
- QA
-
-*balbes-db-6.1.2 (01 Aug 2009)
-
- 01 Aug 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- +balbes-db-6.1.2.ebuild:
- version bump
- adapted to new ccp4-apps
- all non db DEPs removed
-
-*balbes-db-6.1.1-r3 (27 Jul 2009)
-
- 27 Jul 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- -balbes-db-6.1.1-r2.ebuild, +balbes-db-6.1.1-r3.ebuild:
- We do not want db files to be executable
-
-*balbes-db-6.1.1-r2 (02 Jul 2009)
-
- 02 Jul 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- -balbes-db-6.1.1.ebuild, -balbes-db-6.1.1-r1.ebuild,
- +balbes-db-6.1.1-r2.ebuild:
- balbes-db was installed in wrong place
-
-*balbes-db-6.1.1-r1 (30 Apr 2009)
-
- 30 Apr 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> balbes-db-6.1.1-r1.ebuild
- We now have monomer-db as a seperate package so we use it now and remove redundant
- things
-
- 13 Mar 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
- balbes-db-6.1.1.ebuild:
- RESTRICT="binchecks strip" to save time
-
- 27 Feb 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> ChangeLog:
- Moved in from dberkholz overlay
-
diff --git a/sci-libs/balbes-db/Manifest b/sci-libs/balbes-db/Manifest
deleted file mode 100644
index c74e760f3..000000000
--- a/sci-libs/balbes-db/Manifest
+++ /dev/null
@@ -1,19 +0,0 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-DIST ccp4-6.1.1-balbesdb-10-11-08.tar.gz 600680516 RMD160 2fa444b1a290d1853d5ded605e1b343415e100fc SHA1 df0034becd821d5bd985dec34107ec30c282eb62 SHA256 099e8e690bcae8cb43b28ec9bf0250b1275b659c9e77f7ea7236e510370f203e
-DIST ccp4-6.1.2-balbesdb-10-11-08.tar.gz 600855058 RMD160 81994c17b13293714d740761fa6125dde34a8d7a SHA1 7816f3ac0bf16f9e4d91c8f74f30ad14d8937ece SHA256 9523f5bab95270b8d7cb205654cb7c294248b16e9e4e4c621abcb2c78da4d2f0
-DIST ccp4-6.1.3-balbesdb-10-11-08.tar.gz 600856059 RMD160 4b57aecf3d0961ea4043c04074e686b8950b903a SHA1 ca162be8de10860afbb0fe0b17e12a3ee5d0cfef SHA256 5606fc5e131138b56fa3a1afce014225a6c07826b99587f132f6c337585f4f0d
-EBUILD balbes-db-6.1.1-r3.ebuild 1132 RMD160 ba7e8a0d2de1711e8bbd6c069b0ac91623c75979 SHA1 3d1488b33f00dda0f373ddaa10e54b7a11610dca SHA256 5e5f3a34a6436fce0fb19b2a5f00cd00ce681a82a42d417643266c0f711978e9
-EBUILD balbes-db-6.1.2-r1.ebuild 1268 RMD160 bbcc8316d55d158ba195128df20e7eabdb857024 SHA1 5ddf6037d5e314dbf30931aa15618e4cb9dc59f8 SHA256 aeaf055cfde18cc24fe3671d4d6307c5b976fef240285d55564633ccc3f89fdc
-EBUILD balbes-db-6.1.2.ebuild 1158 RMD160 c7f42e8653ff27367357fa7ae918fcf730badc88 SHA1 b92d8df4a6a25dddb005438a7f9ac83430276f3a SHA256 88fa5c10f363f6b58afeb7350c9b04f15cc2eea8993ee9b5da47283f8656333d
-EBUILD balbes-db-6.1.3.ebuild 1268 RMD160 bbcc8316d55d158ba195128df20e7eabdb857024 SHA1 5ddf6037d5e314dbf30931aa15618e4cb9dc59f8 SHA256 aeaf055cfde18cc24fe3671d4d6307c5b976fef240285d55564633ccc3f89fdc
-MISC ChangeLog 1526 RMD160 61cc99f0d1fb9ad6b7dee132a7d8b5da8ef50d36 SHA1 bf8b3dcdf1c49ed915ed233acbb7c7f9a98f274f SHA256 5897436f36e5e7897203661ee0aa75ef31997261fdabb81de79a2f64d4a3e807
-MISC metadata.xml 215 RMD160 bc9c07aa91f2f175542244e4e4522a73558210a1 SHA1 facb283386de1c0b6b938cdcd4dde04d1694298b SHA256 13f32353652adbd3d934d41381cfc2cacc9e1127c508cebc73806cc1026ee80c
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
-
-iEYEARECAAYFAksxTYYACgkQgAnW8HDreRbtewCgkyqGq+molSAnTjfD3VT5PSVe
-QgcAnAv6R2zAhOyEQZbc4bOfxEtpj+Zz
-=eI1t
------END PGP SIGNATURE-----
diff --git a/sci-libs/balbes-db/balbes-db-6.1.1-r3.ebuild b/sci-libs/balbes-db/balbes-db-6.1.1-r3.ebuild
deleted file mode 100644
index 70d01991f..000000000
--- a/sci-libs/balbes-db/balbes-db-6.1.1-r3.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-MY_P="ccp4-${PV}"
-
-SRC="ftp://ftp.ccp4.ac.uk/ccp4"
-
-DESCRIPTION="The database for the BALBES automated crystallographic molecular replacement pipeline"
-HOMEPAGE="http://www.ysbl.york.ac.uk/~fei/balbes/"
-#SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/_}.tar.gz"
-SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/}-10-11-08.tar.gz"
-LICENSE="ccp4"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-RDEPEND=">=dev-python/pyxml-0.8.4
- >=sci-chemistry/ccp4-6.1
- sci-chemistry/refmac
- sci-libs/monomer-db"
-DEPEND="${RDEPEND}"
-S="${WORKDIR}/${MY_P}"
-RESTRICT="binchecks strip"
-
-src_compile() {
- :
-}
-
-src_install() {
- dodir /usr/share/balbes/BALBES_0.0.1
- rm -rf share/balbes/BALBES_0.0.1/dic
- # We don't want to wait around to copy all this, or suck up double
- # the disk space
- mv "${S}"/share/balbes/BALBES_0.0.1/* "${D}"/usr/share/balbes/BALBES_0.0.1/ || die
- # db files should be executable
- find "${D}"/usr/share/balbes/BALBES_0.0.1/ \
- -type f \
- -exec chmod 664 '{}' \;
- dosym ../../../ccp4/data/monomers /usr/share/balbes/BALBES_0.0.1/dic
-}
diff --git a/sci-libs/balbes-db/balbes-db-6.1.2-r1.ebuild b/sci-libs/balbes-db/balbes-db-6.1.2-r1.ebuild
deleted file mode 100644
index 6bd0237d9..000000000
--- a/sci-libs/balbes-db/balbes-db-6.1.2-r1.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-MY_P="ccp4-${PV}"
-
-SRC="ftp://ftp.ccp4.ac.uk/ccp4"
-
-DESCRIPTION="The database for the BALBES automated crystallographic molecular replacement pipeline"
-HOMEPAGE="http://www.ysbl.york.ac.uk/~fei/balbes/"
-#SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/_}.tar.gz"
-SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/}-10-11-08.tar.gz"
-
-LICENSE="ccp4"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
- >=dev-python/pyxml-0.8.4
- sci-libs/monomer-db"
-DEPEND="${RDEPEND}"
-RESTRICT="binchecks strip"
-
-S="${WORKDIR}/${MY_P}"
-
-src_compile() {
- :
-}
-
-src_install() {
- dodir /usr/share/balbes/BALBES_0.0.1
- rm -rf share/balbes/BALBES_0.0.1/dic
- # We don't want to wait around to copy all this, or suck up double
- # the disk space
- einfo "Installing files, which can take some time ..."
- mv "${S}"/share/balbes/BALBES_0.0.1/* "${D}"/usr/share/balbes/BALBES_0.0.1/ || die
- # db files should be executable
- find "${D}"/usr/share/balbes/BALBES_0.0.1/ \
- -type f \
- -exec chmod 664 '{}' \;
- eend
- dosym ../../../ccp4/data/monomers /usr/share/balbes/BALBES_0.0.1/dic || die
-
- cat >> "${T}"/20balbes <<- EOF
- BALBES_ROOT="/usr/share/balbes/BALBES_0.0.1/"
- EOF
-
- doenvd "${T}"/20balbes
-}
diff --git a/sci-libs/balbes-db/balbes-db-6.1.2.ebuild b/sci-libs/balbes-db/balbes-db-6.1.2.ebuild
deleted file mode 100644
index f5a9e7cf2..000000000
--- a/sci-libs/balbes-db/balbes-db-6.1.2.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-MY_P="ccp4-${PV}"
-
-SRC="ftp://ftp.ccp4.ac.uk/ccp4"
-
-DESCRIPTION="The database for the BALBES automated crystallographic molecular replacement pipeline"
-HOMEPAGE="http://www.ysbl.york.ac.uk/~fei/balbes/"
-#SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/_}.tar.gz"
-SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/}-10-11-08.tar.gz"
-
-LICENSE="ccp4"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
- >=dev-python/pyxml-0.8.4
- sci-libs/monomer-db"
-DEPEND="${RDEPEND}"
-RESTRICT="binchecks strip"
-
-S="${WORKDIR}/${MY_P}"
-
-src_compile() {
- :
-}
-
-src_install() {
- dodir /usr/share/balbes/BALBES_0.0.1
- rm -rf share/balbes/BALBES_0.0.1/dic
- # We don't want to wait around to copy all this, or suck up double
- # the disk space
- einfo "Installing files, which can take some time ..."
- mv "${S}"/share/balbes/BALBES_0.0.1/* "${D}"/usr/share/balbes/BALBES_0.0.1/ || die
- # db files should be executable
- find "${D}"/usr/share/balbes/BALBES_0.0.1/ \
- -type f \
- -exec chmod 664 '{}' \;
- eend
- dosym ../../../ccp4/data/monomers /usr/share/balbes/BALBES_0.0.1/dic || die
-}
diff --git a/sci-libs/balbes-db/balbes-db-6.1.3.ebuild b/sci-libs/balbes-db/balbes-db-6.1.3.ebuild
deleted file mode 100644
index 6bd0237d9..000000000
--- a/sci-libs/balbes-db/balbes-db-6.1.3.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-MY_P="ccp4-${PV}"
-
-SRC="ftp://ftp.ccp4.ac.uk/ccp4"
-
-DESCRIPTION="The database for the BALBES automated crystallographic molecular replacement pipeline"
-HOMEPAGE="http://www.ysbl.york.ac.uk/~fei/balbes/"
-#SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/_}.tar.gz"
-SRC_URI="${SRC}/${PV}/${MY_P}-${PN/-/}-10-11-08.tar.gz"
-
-LICENSE="ccp4"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
- >=dev-python/pyxml-0.8.4
- sci-libs/monomer-db"
-DEPEND="${RDEPEND}"
-RESTRICT="binchecks strip"
-
-S="${WORKDIR}/${MY_P}"
-
-src_compile() {
- :
-}
-
-src_install() {
- dodir /usr/share/balbes/BALBES_0.0.1
- rm -rf share/balbes/BALBES_0.0.1/dic
- # We don't want to wait around to copy all this, or suck up double
- # the disk space
- einfo "Installing files, which can take some time ..."
- mv "${S}"/share/balbes/BALBES_0.0.1/* "${D}"/usr/share/balbes/BALBES_0.0.1/ || die
- # db files should be executable
- find "${D}"/usr/share/balbes/BALBES_0.0.1/ \
- -type f \
- -exec chmod 664 '{}' \;
- eend
- dosym ../../../ccp4/data/monomers /usr/share/balbes/BALBES_0.0.1/dic || die
-
- cat >> "${T}"/20balbes <<- EOF
- BALBES_ROOT="/usr/share/balbes/BALBES_0.0.1/"
- EOF
-
- doenvd "${T}"/20balbes
-}
diff --git a/sci-libs/balbes-db/metadata.xml b/sci-libs/balbes-db/metadata.xml
deleted file mode 100644
index efb490d78..000000000
--- a/sci-libs/balbes-db/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-<maintainer>
- <email>sci@gentoo.org</email>
-</maintainer>
-</pkgmetadata>