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authorJustin Lecher <jlec@gentoo.org>2011-09-24 07:43:56 +0200
committerJustin Lecher <jlec@gentoo.org>2011-09-24 07:43:56 +0200
commit3f4c507c66c8e30fac868fe849fa0cdb7b4e8c6a (patch)
treef88347eab6583ebeb9964fa979b8c32312210125
parentMerge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci (diff)
downloadsci-3f4c507c66c8e30fac868fe849fa0cdb7b4e8c6a.tar.gz
sci-3f4c507c66c8e30fac868fe849fa0cdb7b4e8c6a.tar.bz2
sci-3f4c507c66c8e30fac868fe849fa0cdb7b4e8c6a.zip
Use Fedora hosting because unpstream removed the patches
(Portage version: 2.2.0_alpha59/git/Linux x86_64, signed Manifest commit with key 70EB7916)
-rw-r--r--sci-biology/emboss/ChangeLog3
-rw-r--r--sci-biology/emboss/Manifest14
-rw-r--r--sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild3
3 files changed, 12 insertions, 8 deletions
diff --git a/sci-biology/emboss/ChangeLog b/sci-biology/emboss/ChangeLog
index ba5fbeeac..9e8a431f1 100644
--- a/sci-biology/emboss/ChangeLog
+++ b/sci-biology/emboss/ChangeLog
@@ -2,6 +2,9 @@
# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.61 2011/03/09 16:29:05 jlec Exp $
+ 24 Sep 2011; Justin Lecher <jlec@gentoo.org> emboss-6.3.1_p4-r1.ebuild:
+ Use Fedora hosting because unpstream removed the patches
+
27 Mar 2011; Justin Lecher <jlec@gentoo.org> emboss-6.3.1_p4-r1.ebuild,
-files/emboss-6.3.1_p4-r1.patch:
Last fix for 64bitness
diff --git a/sci-biology/emboss/Manifest b/sci-biology/emboss/Manifest
index 263058e6f..60b5ad7bb 100644
--- a/sci-biology/emboss/Manifest
+++ b/sci-biology/emboss/Manifest
@@ -1,17 +1,17 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA512
AUX emboss-README.Gentoo-2 1516 RMD160 bf7727ddf6fbf53fc797dba12181332c9e8e93a0 SHA1 1c531f0c1f52569b1d742ec67cc928cb22970f72 SHA256 47f78101b0759f5c629ebee630c14871f1c579c40336a0666647680bc549914e
DIST EMBOSS-6.3.1.tar.gz 23572243 RMD160 5c1e7b82e50a183d6ccb323f6a619f10efb0da1a SHA1 efb2e9c1c9b038432ce6bd81ee4692d5f1dc2f72 SHA256 4f3290600a970c2a23a7e47f884d1fc8156ec40538f7191a6e83e23680d27a8d
DIST emboss-6.3.1_p4-r1.patch.bz2 9429 RMD160 6b4759b17bf9ef763c5eb9fabeef72f895e64c63 SHA1 ad92db295dd8ec6190c22bd192418629fbd6ab5d SHA256 4ceb304032f9e0d1977afae43055975ff51c186f1707749476da8b0bfb8b3619
DIST emboss-6.3.1_p4-upstream.patch.gz 4070 RMD160 cdfc45a39d33a78453a3f7a18913e18862b2d117 SHA1 5ce862eeaf5be628d64d44179aa37102faf53c85 SHA256 61d1b62e3148541d496103711db6526ba76488a0899af2c98264b03bf8d6e24c
-EBUILD emboss-6.3.1_p4-r1.ebuild 2387 RMD160 3eab08f9f4413f401b623a885bcb52a3aacfeaa5 SHA1 f35311e80fff1547fb8351a62b054b93792fb698 SHA256 248a260cbb6de4d84f2eb5e07addb810bf020b0e440dd11522ba775aed5261a6
-MISC ChangeLog 12263 RMD160 add12f0cce2d78cc32766c2878f7961bab43c411 SHA1 b90055834a3d5527fce6f6065bce1804bb26f2d3 SHA256 9ab369861943cda75f4751dc2f1bbbf0864a32b457d9486c0dc960f03a50d6e7
+EBUILD emboss-6.3.1_p4-r1.ebuild 2574 RMD160 240b2520820f89495a88de9eb82dd530a1f13f34 SHA1 133e2c4d07ac7beced416dfce869d479a63c150b SHA256 d6e07787aab1750101cb3ef09013ba09d189fef148d2269f1ce439c605b77fe4
+MISC ChangeLog 12397 RMD160 7a9bd33347040cb63a9282ddff0548f213155fe3 SHA1 736d49d5703bc4755e76e9cd56f11819cbd8e5ed SHA256 b1e9ef5020dd2c37efebf023af0be8c48ef4361f9347ecde20216b0775a8067e
MISC metadata.xml 924 RMD160 0012a7f8446b6e3ade6b18e2b015bfb80c546712 SHA1 3d47f955e2c7e10fe71ba427c19cc51000990caf SHA256 9a25a29f9ad98792903c439ad7dd4ec485e44e60e23beaf1fa4c209ea89be49b
-----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.17 (GNU/Linux)
+Version: GnuPG v2.0.18 (GNU/Linux)
-iEYEARECAAYFAk2PXNYACgkQgAnW8HDreRYEBwCfd/JKtbBV5NjZUAlqcESibbUm
-0FgAn2zhgd20nkZ6wpVLuAU5rmKokzRB
-=bies
+iEYEAREKAAYFAk59bhsACgkQgAnW8HDreRbtugCgmtE8gxTe1Ew5q6lsnEchdqTH
+0w8AmQHL6QfG82MAQWNL/vrEC64cVF/8
+=lRFw
-----END PGP SIGNATURE-----
diff --git a/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild b/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
index 15a4d2a4d..137eab72f 100644
--- a/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
+++ b/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
@@ -13,7 +13,8 @@ DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence ana
SRC_URI="
ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz
http://dev.gentoo.org/~jlec/distfiles/${PF}.patch.bz2"
-[[ -n ${EBO_PATCH} ]] && SRC_URI+=" ftp://${PN}.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-${EBO_PATCH}.gz -> ${P}-upstream.patch.gz"
+##[[ -n ${EBO_PATCH} ]] && SRC_URI+=" ftp://${PN}.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-${EBO_PATCH}.gz -> ${P}-upstream.patch.gz"
+[[ -n ${EBO_PATCH} ]] && SRC_URI+=" http://pkgs.fedoraproject.org/lookaside/pkgs/EMBOSS/patch-1-4.gz/7a42594c5eda4adc6457f33e4ab0d8f2/patch-1-${EBO_PATCH}.gz -> ${P}-upstream.patch.gz"
KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE+=" minimal"