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authorAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-03-06 14:15:13 +0100
committerAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-03-06 14:15:13 +0100
commit454d4e4876455ed72069bf2343c499b2a5184901 (patch)
treef5ef4277e2e8e86646b6653496a635fce500fd6e
parentsci-biology/nxtrim: EAPI bump, vers 0.4.3, fix install (diff)
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sci-biology/parafly: fix this, EAPI bump
- fixed description - fixed homepage - fixed src_uri Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
-rw-r--r--sci-biology/parafly/Manifest2
-rw-r--r--sci-biology/parafly/parafly-0.1.0.ebuild21
-rw-r--r--sci-biology/parafly/parafly-20130121.ebuild26
3 files changed, 22 insertions, 27 deletions
diff --git a/sci-biology/parafly/Manifest b/sci-biology/parafly/Manifest
index b70d01fe5..4818dac2c 100644
--- a/sci-biology/parafly/Manifest
+++ b/sci-biology/parafly/Manifest
@@ -1 +1 @@
-DIST TransDecoder_r20140704.tar.gz 21189681 BLAKE2B 9d6602cb9ef9f05dcfbc7f04aa07c0fad067d04af454f9d6a31baeb62e883cf9eb20a29ea0cc5505968c05143738c308fca7bfda00f689d7639f88c2baa02a1c SHA512 fa70e440c3f8b8d11da780858ff6433adf9065b126b29eb047983b17913e382c677a272881ee78be8e30867bbd447eb9bda71bd11abda5203d6a3abfb5316e90
+DIST parafly-0.1.0.tar.gz 233214 BLAKE2B 7f98ea21e9970bee227f4b2525dd1b3c514ac063ff0733ea36f98153d5a58b6a75a5ae3d57ead3fde6f88a2a5874911c607655458f48b1aea94e0bbe78ecddb4 SHA512 087385025d70c07472ccce86ca9027d5cc6c0df477b50abbb6757e21b5f95569176b982c2de05b51a80d58efdf27913fd8f7f0bb51cc9727267d9552e463138f
diff --git a/sci-biology/parafly/parafly-0.1.0.ebuild b/sci-biology/parafly/parafly-0.1.0.ebuild
new file mode 100644
index 000000000..ce1084020
--- /dev/null
+++ b/sci-biology/parafly/parafly-0.1.0.ebuild
@@ -0,0 +1,21 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DESCRIPTION="Parallel cmd processing utility"
+HOMEPAGE="https://github.com/ParaFly/ParaFly"
+SRC_URI="https://github.com/ParaFly/ParaFly/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD-BroadInstitute"
+SLOT="0"
+KEYWORDS="~amd64"
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/ParaFly-${PV}"
+
+src_configure(){
+ ./configure --prefix="${EPREFIX}"/usr
+}
diff --git a/sci-biology/parafly/parafly-20130121.ebuild b/sci-biology/parafly/parafly-20130121.ebuild
deleted file mode 100644
index fe3e26c6c..000000000
--- a/sci-biology/parafly/parafly-20130121.ebuild
+++ /dev/null
@@ -1,26 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Some dependency for transdecoder"
-HOMEPAGE="https://sourceforge.net/projects/transdecoder/"
-SRC_URI="https://sourceforge.net/projects/transdecoder/files/OLDER/TransDecoder_r20140704.tar.gz"
-# are current sources available only from here?
-# https://github.com/trinityrnaseq/trinityrnaseq/tree/f81f0497a211c84ba4299063086604760933e6e3/trinity-plugins/parafly-code
-
-LICENSE="BSD-BroadInstitute"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}"/TransDecoder_r20140704/3rd_party/parafly-r2013-01-21
-
-# maybe we once the CXXFLAGS and LDFLAGS mentioned
-# in https://github.com/trinityrnaseq/trinityrnaseq/issues/65 ?
-src_configure(){
- ./configure --prefix="${EPREFIX}"/usr
-}