diff options
| author |   Horea Christian <chr@chymera.eu> | 2020-09-27 03:47:04 -0400 |
|---|---|---|
| committer | Horea Christian <chr@chymera.eu> | 2020-09-27 03:47:04 -0400 |
| commit | 881e4dfb05d5743b030dcc678b98b56a95bb5322 (patch) | |
| tree | 56a117d04e6b449fdc5ee1d1f3cd2ddc407f0870 | |
| parent | sci-biology/metaseq: removed discontinued package (diff) | |
| download | sci-881e4dfb05d5743b030dcc678b98b56a95bb5322.tar.gz sci-881e4dfb05d5743b030dcc678b98b56a95bb5322.tar.bz2 sci-881e4dfb05d5743b030dcc678b98b56a95bb5322.zip | |
sci-biology/nesoni: removed package with deprecated dep
sci-biology/shrimp is dead upstream and will be pulled from ::gentoo
https://bugs.gentoo.org/735440
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr@chymera.eu>
| -rw-r--r-- | sci-biology/nesoni/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/nesoni/metadata.xml | 12 | ||||
| -rw-r--r-- | sci-biology/nesoni/nesoni-0.128.ebuild | 32 |
3 files changed, 0 insertions, 45 deletions
diff --git a/sci-biology/nesoni/Manifest b/sci-biology/nesoni/Manifest deleted file mode 100644 index 1b00acdce..000000000 --- a/sci-biology/nesoni/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST nesoni-0.128.tar.gz 252773 BLAKE2B 79807e456fac3b0826ec3485d3f67ad13154c5d24a8ec7807cf3fa1765edd3c467d27ff5cbd2dac77a28444b0b3802f055c091b1ff64c29ebac460189d4c9f7d SHA512 8df36b11b0371c5895d690b7497a298a34154f7c14f05d340f9fa5d6352d96e49e4a1b1e4e2089bce0a652bbc3911c8d6b361055263ffd573274b62955df0462 diff --git a/sci-biology/nesoni/metadata.xml b/sci-biology/nesoni/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/nesoni/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-biology/nesoni/nesoni-0.128.ebuild b/sci-biology/nesoni/nesoni-0.128.ebuild deleted file mode 100644 index 096214e35..000000000 --- a/sci-biology/nesoni/nesoni-0.128.ebuild +++ /dev/null @@ -1,32 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit distutils-r1 eutils - -DESCRIPTION="Analysis package for next-generation sequencing data and prepare for IGV display" -HOMEPAGE="http://www.vicbioinformatics.com/software.nesoni.shtml" -SRC_URI="http://www.vicbioinformatics.com/"${P}".tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -DEPEND="" -RDEPEND="${DEPEND} - sci-biology/shrimp - sci-biology/bowtie - sci-biology/mummer - sci-biology/biopython - sci-biology/picard - dev-lang/R" - - # sci-biology/freebayes - # SplitsTree4 http://www.splitstree.org/ - # BioConductor (limma, edgeR, goseq) - # seriation - # NMF |