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authorMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2019-03-25 12:20:55 +0100
committerMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2019-03-25 12:20:55 +0100
commit922b05adcf80432d8e8212128b90b456b8ad3fc5 (patch)
treea713755076118533b4324b2a00c46c09fde6f26a
parentdev-java/htsjdk: 2.3.0 which was the last using Apache ant (diff)
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sci-biology/bowtie: update SRC_URI and hash for 2.3.5
Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
-rw-r--r--sci-biology/bowtie/Manifest2
-rw-r--r--sci-biology/bowtie/bowtie-2.3.5.ebuild (renamed from sci-biology/bowtie/bowtie-2.3.4.3.ebuild)1
2 files changed, 2 insertions, 1 deletions
diff --git a/sci-biology/bowtie/Manifest b/sci-biology/bowtie/Manifest
index 87beeab0c..0b233a555 100644
--- a/sci-biology/bowtie/Manifest
+++ b/sci-biology/bowtie/Manifest
@@ -1 +1 @@
-DIST bowtie2-2.3.4.3-source.zip 17156180 BLAKE2B 4004aa417f318f5540b129eb97d7f14d31b087c77bb767d547b195d3b966ec272fe7df5888d60b5501330d2ac011f05bdc9b062fa34d5b96b2b29ea0b6167a5c SHA512 9e048c1a86a479c5fe728a492129372d2366d6c50530e05db3faad5ac055596d9f95ac0a9f50099ab3dd945893a587c02e8aaa9b62cc3ead75f6691c52413a2f
+DIST bowtie2-2.3.5-source.zip 14739842 BLAKE2B eb34004c6f9ed29e4c204d92973bd089708247cb816e695f7df85d05ee336fc62ed11130a3cfbbacca8bb8cdc9af279e67d0457d28d6c3b0d2aa3e8a79b92a11 SHA512 8b16a9f3ff324f379afed204ebcd0b71a3123a6d5eab7f8832835d9ba509a5013ce66bb65189728a2c23615b6f49b9e488847fa8d054e2ae6c9658d99470549e
diff --git a/sci-biology/bowtie/bowtie-2.3.4.3.ebuild b/sci-biology/bowtie/bowtie-2.3.5.ebuild
index eea3059cf..dd4d8be66 100644
--- a/sci-biology/bowtie/bowtie-2.3.4.3.ebuild
+++ b/sci-biology/bowtie/bowtie-2.3.5.ebuild
@@ -8,6 +8,7 @@ inherit toolchain-funcs
DESCRIPTION="Popular short read aligner for Next-generation sequencing data"
HOMEPAGE="http://bowtie-bio.sourceforge.net/bowtie2/"
SRC_URI="mirror://sourceforge/project/${PN}-bio/${PN}2/${PV}/${PN}2-${PV}-source.zip"
+SRC_URI="https://github.com/BenLangmead/${PN}2/releases/download/v${PV}/${PN}2-${PV}-source.zip"
LICENSE="GPL-3"
SLOT="2"