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authorJustin Lecher (jlec) <jlec@gentoo.org>2010-02-07 22:22:46 +0100
committerJustin Lecher (jlec) <jlec@gentoo.org>2010-02-07 22:22:46 +0100
commit9362006d508ae766614cd4896c93ec8bf60bcf73 (patch)
treecd2eb3b6bf688e37f4a223931a145ac566449b17
parentInCvs (diff)
downloadsci-9362006d508ae766614cd4896c93ec8bf60bcf73.tar.gz
sci-9362006d508ae766614cd4896c93ec8bf60bcf73.tar.bz2
sci-9362006d508ae766614cd4896c93ec8bf60bcf73.zip
InCvs
-rw-r--r--sci-chemistry/azara/ChangeLog10
-rw-r--r--sci-chemistry/azara/Manifest5
-rw-r--r--sci-chemistry/azara/azara-2.7.ebuild76
-rw-r--r--sci-chemistry/azara/files/help-makefile.patch196
-rw-r--r--sci-chemistry/azara/metadata.xml10
5 files changed, 0 insertions, 297 deletions
diff --git a/sci-chemistry/azara/ChangeLog b/sci-chemistry/azara/ChangeLog
deleted file mode 100644
index 91ef161ab..000000000
--- a/sci-chemistry/azara/ChangeLog
+++ /dev/null
@@ -1,10 +0,0 @@
-# ChangeLog for sci-chemistry/azara
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 13 Feb 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> ChangeLog:
- Corrected spelling of L(D)FLAGS so that linking respects LDFLAGS
-
- 24 Dec 2008; Justin Lecher (jlec) <jlec@j-schmitz.net> +metadata.xml:
- Setup sci-chemistry/azara
- bug 256404
diff --git a/sci-chemistry/azara/Manifest b/sci-chemistry/azara/Manifest
deleted file mode 100644
index a82eb42b4..000000000
--- a/sci-chemistry/azara/Manifest
+++ /dev/null
@@ -1,5 +0,0 @@
-AUX help-makefile.patch 4278 RMD160 1293ad23185d5d6ca6f3aa8e0429cb44635a9b91 SHA1 4220a44556b37d0b644bc829768fc42f3b1cb07d SHA256 9847738d161197912a12543b85988cbb6d6e1345181cfabb6e502af4c5d7735e
-DIST azara-2.7-src.tar.gz 565272 RMD160 2426102dbb87984f88ec1266b72d2e307484af0c SHA1 53caa85953f700cdc4ec9ef26d2bb7d9448b77b0 SHA256 d639682d813278d2955b911c16ac0f9121cb3cf3fde6c5da4cf7bb79e478486d
-EBUILD azara-2.7.ebuild 1619 RMD160 b047b0adee83099cf995c09f011d757ef3bd27ab SHA1 13769f1796043adbca691d9ec855a2e9da8f04ba SHA256 4e5e616d60c6f00533fa0e0e3f711dec739a01c4cb581278813b8bf1d2104596
-MISC ChangeLog 369 RMD160 23e063f5f99a4fbdbe2f70bd18488e7f9211f946 SHA1 92768ed5c1bf5b0d68fa2ff30baeef7b2c4b5132 SHA256 ec43cb51a2f9f9207fcc48f48418e81b7bb015e9f41ad1c54c8942ac10330390
-MISC metadata.xml 273 RMD160 77dd0acbd8530bfceee840dfeccd1f4228e0460b SHA1 7c6794b74e4f357c0cd501266226eda09417d6ee SHA256 ed6f9e4b8aa59f68498bb75bf3be63a6de60feda167e4ceb12c7cb81bf8aac09
diff --git a/sci-chemistry/azara/azara-2.7.ebuild b/sci-chemistry/azara/azara-2.7.ebuild
deleted file mode 100644
index cd51c226e..000000000
--- a/sci-chemistry/azara/azara-2.7.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit eutils
-
-DESCRIPTION="A suite of programmes to process and view NMR data"
-HOMEPAGE="http://www.bio.cam.ac.uk/azara/"
-SRC_URI="http://www.bio.cam.ac.uk/ccpn/download/${PN}/${P}-src.tar.gz"
-
-LICENSE="AZARA"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-IUSE="opengl X xpm"
-RDEPEND=""
-DEPEND="${RDEPEND}
- xpm? ( x11-libs/libXpm )
- X? ( x11-libs/libX11 )"
-
-src_unpack() {
- unpack ${A}
- cd "${S}"
-
- echo "" > ENVIRONMENT
-
- epatch "${FILESDIR}"/help-makefile.patch
-}
-
-
-src_compile() {
-
- local mymake
- local XPMUSE
-
- mymake="${mymake} help nongui"
- use X && mymake="${mymake} gui"
- use opengl && mymake="${mymake} gl"
- use xpm && XPMUSE="XPM_FLAG=-DUSE_XPM XPM_LIB=-lXpm"
-
- emake -j1 CC=$(tc-getCC) \
- CFLAGS="${CFLAGS}" \
- LFLAGS="${LDFLAGS}" \
- MATH_LIB="-lm" \
- X11_INCLUDE_DIR="-I/usr/X11R6/include" \
- MOTIF_INCLUDE_DIR="-I/usr/include" \
- X11_LIB_DIR="-L/usr/$(get_libdir)" \
- MOTIF_LIB_DIR="-L/usr/$(get_libdir)" \
- ${XPMUSE} \
- X11_LIB="-lX11" \
- MOTIF_LIB="-lXm -lXt" \
- GL_INCLUDE_DIR="-I/usr/X11R6/include -I/usr/include" \
- GL_LIB_DIR="-I/usr/lib" \
- GL_LIB="-lglut -lGLU -lGL -lXmu -lX11 -lXext" \
- ENDIAN_FLAG="-DLITTLE_ENDIAN_DATA" \
- ${mymake} || \
- die "make failed"
-
-}
-
-src_install() {
-
- for bin in bin/*; do
- dobin "${bin}" || die "failed to install ${bin}"
- done
-
- mv "${D}"/usr/bin/{,azara-}extract || die "failed to fix extract collision"
-
- dodoc CHANGES* README*
- dohtml html/*
-}
-
-pkg_postinst() {
- einfo "Due to collision we moved the extract binary to azara-extract"
-}
diff --git a/sci-chemistry/azara/files/help-makefile.patch b/sci-chemistry/azara/files/help-makefile.patch
deleted file mode 100644
index 5a4203473..000000000
--- a/sci-chemistry/azara/files/help-makefile.patch
+++ /dev/null
@@ -1,196 +0,0 @@
---- help/makefile 2002-11-01 13:27:27.000000000 +0100
-+++ help/makefile.new 2008-12-24 14:45:56.141225333 +0100
-@@ -37,102 +37,102 @@
- .c.o:; $(CC) -c $(CFLAGS) $<
-
- hlp:
-- txt2hlp azara
-- txt2hlp combine
-- txt2hlp components
-- txt2hlp connect
-- txt2hlp contours
-- txt2hlp deflate
-- txt2hlp extract
-- txt2hlp peak_find
-- txt2hlp peak_fit
-- txt2hlp plot1
-- txt2hlp plot2
-- txt2hlp process
-- txt2hlp project
-- txt2hlp slides
-- txt2hlp reflate
-- txt2hlp unblock
-- txt2hlp viewer
-- txt2hlp plot2/baseline
-- txt2hlp plot2/data
-- txt2hlp plot2/extract
-- txt2hlp plot2/levels
-- txt2hlp plot2/object
-- txt2hlp plot2/output
-- txt2hlp plot2/peak
-- txt2hlp plot2/peaks
-- txt2hlp plot2/phase
-- txt2hlp plot2/property
-- txt2hlp plot2/region
-- txt2hlp plot2/rowcol
-- txt2hlp plot2/save
-- txt2hlp plot2/tracking
-- txt2hlp plot1/button
-- txt2hlp plot1/data
-- txt2hlp plot1/object
-- txt2hlp plot1/output
-- txt2hlp plot1/property
-- txt2hlp plot1/region
-- txt2hlp plot1/slider
-- txt2hlp plot1/text
-+ ./txt2hlp azara
-+ ./txt2hlp combine
-+ ./txt2hlp components
-+ ./txt2hlp connect
-+ ./txt2hlp contours
-+ ./txt2hlp deflate
-+ ./txt2hlp extract
-+ ./txt2hlp peak_find
-+ ./txt2hlp peak_fit
-+ ./txt2hlp plot1
-+ ./txt2hlp plot2
-+ ./txt2hlp process
-+ ./txt2hlp project
-+ ./txt2hlp slides
-+ ./txt2hlp reflate
-+ ./txt2hlp unblock
-+ ./txt2hlp viewer
-+ ./txt2hlp plot2/baseline
-+ ./txt2hlp plot2/data
-+ ./txt2hlp plot2/extract
-+ ./txt2hlp plot2/levels
-+ ./txt2hlp plot2/object
-+ ./txt2hlp plot2/output
-+ ./txt2hlp plot2/peak
-+ ./txt2hlp plot2/peaks
-+ ./txt2hlp plot2/phase
-+ ./txt2hlp plot2/property
-+ ./txt2hlp plot2/region
-+ ./txt2hlp plot2/rowcol
-+ ./txt2hlp plot2/save
-+ ./txt2hlp plot2/tracking
-+ ./txt2hlp plot1/button
-+ ./txt2hlp plot1/data
-+ ./txt2hlp plot1/object
-+ ./txt2hlp plot1/output
-+ ./txt2hlp plot1/property
-+ ./txt2hlp plot1/region
-+ ./txt2hlp plot1/slider
-+ ./txt2hlp plot1/text
-
- html:
-- txt2html azara
-- txt2html combine
-- txt2html components
-- txt2html connect
-- txt2html contours
-- txt2html deflate
-- txt2html extract
-- txt2html peak_find
-- txt2html peak_fit
-- txt2html plot1
-- txt2html plot2
-- txt2html process
-- txt2html project
-- txt2html slides
-- txt2html reflate
-- txt2html unblock
-- txt2html viewer
-- txt2html plot2/baseline
-- txt2html plot2/data
-- txt2html plot2/extract
-- txt2html plot2/levels
-- txt2html plot2/object
-- txt2html plot2/output
-- txt2html plot2/peak
-- txt2html plot2/peaks
-- txt2html plot2/phase
-- txt2html plot2/property
-- txt2html plot2/region
-- txt2html plot2/rowcol
-- txt2html plot2/save
-- txt2html plot2/tracking
-- txt2html plot1/button
-- txt2html plot1/data
-- txt2html plot1/object
-- txt2html plot1/output
-- txt2html plot1/property
-- txt2html plot1/region
-- txt2html plot1/slider
-- txt2html plot1/text
-- txt2html CHANGES
-- txt2html INSTALL
-- txt2html README-2.7
-- txt2html CHANGES-1.0-1
-- txt2html CHANGES-1.0-2
-- txt2html CHANGES-1.0-3
-- txt2html CHANGES-2.0-0
-- txt2html CHANGES-2.5-0
-- txt2html CHANGES-2.6-0
-- txt2html CHANGES-2.7-0
-- txt2html LICENSE
-+ ./txt2html azara
-+ ./txt2html combine
-+ ./txt2html components
-+ ./txt2html connect
-+ ./txt2html contours
-+ ./txt2html deflate
-+ ./txt2html extract
-+ ./txt2html peak_find
-+ ./txt2html peak_fit
-+ ./txt2html plot1
-+ ./txt2html plot2
-+ ./txt2html process
-+ ./txt2html project
-+ ./txt2html slides
-+ ./txt2html reflate
-+ ./txt2html unblock
-+ ./txt2html viewer
-+ ./txt2html plot2/baseline
-+ ./txt2html plot2/data
-+ ./txt2html plot2/extract
-+ ./txt2html plot2/levels
-+ ./txt2html plot2/object
-+ ./txt2html plot2/output
-+ ./txt2html plot2/peak
-+ ./txt2html plot2/peaks
-+ ./txt2html plot2/phase
-+ ./txt2html plot2/property
-+ ./txt2html plot2/region
-+ ./txt2html plot2/rowcol
-+ ./txt2html plot2/save
-+ ./txt2html plot2/tracking
-+ ./txt2html plot1/button
-+ ./txt2html plot1/data
-+ ./txt2html plot1/object
-+ ./txt2html plot1/output
-+ ./txt2html plot1/property
-+ ./txt2html plot1/region
-+ ./txt2html plot1/slider
-+ ./txt2html plot1/text
-+ ./txt2html CHANGES
-+ ./txt2html INSTALL
-+ ./txt2html README-2.7
-+ ./txt2html CHANGES-1.0-1
-+ ./txt2html CHANGES-1.0-2
-+ ./txt2html CHANGES-1.0-3
-+ ./txt2html CHANGES-2.0-0
-+ ./txt2html CHANGES-2.5-0
-+ ./txt2html CHANGES-2.6-0
-+ ./txt2html CHANGES-2.7-0
-+ ./txt2html LICENSE
-
- clean:
- rm *.o
-
- realclean:
- rm *.o
-- rm txt2hlp
-- rm txt2html
-+ rm ./txt2hlp
-+ rm ./txt2html
diff --git a/sci-chemistry/azara/metadata.xml b/sci-chemistry/azara/metadata.xml
deleted file mode 100644
index 9b727ece3..000000000
--- a/sci-chemistry/azara/metadata.xml
+++ /dev/null
@@ -1,10 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <herd>maintainer-wanted</herd>
- <maintainer>
- <email>jlec@j-schmitz.net</email>
- <name>Justin Lecher (jlec)</name>
- </maintainer>
-</pkgmetadata>
-