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authorAndrew Ammerlaan <andrewammerlaan@gentoo.org>2022-01-23 13:53:13 +0100
committerAndrew Ammerlaan <andrewammerlaan@gentoo.org>2022-01-23 13:53:13 +0100
commitadf7383fa934d9a68a5ebb9d394fd963b1dd8c57 (patch)
treebfa25905c37783a3eda05aac49af045ae95ee2c4
parentsci-misc/europa-bin: remove package (diff)
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sci-biology/jtreeview: remove old java package
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
-rw-r--r--profiles/package.mask4
-rw-r--r--sci-biology/jtreeview/Manifest2
-rw-r--r--sci-biology/jtreeview/jtreeview-1.2.0.ebuild39
-rw-r--r--sci-biology/jtreeview/jtreeview-9999.ebuild30
-rw-r--r--sci-biology/jtreeview/metadata.xml16
5 files changed, 0 insertions, 91 deletions
diff --git a/profiles/package.mask b/profiles/package.mask
index 0781ef1e3..9a0a75e44 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -76,7 +76,3 @@ sci-biology/quorum
# No updates since 2009(!), no longer compiles
# Removal in 30 days
sci-biology/jigsaw
-
-# Andrew Ammerlaan <andrewammerlaan@gentoo.org (21 Jan 2022)
-# Requires dev-java/nanoxml which is masked for removal in ::gentoo
-sci-biology/jtreeview
diff --git a/sci-biology/jtreeview/Manifest b/sci-biology/jtreeview/Manifest
deleted file mode 100644
index db64018f4..000000000
--- a/sci-biology/jtreeview/Manifest
+++ /dev/null
@@ -1,2 +0,0 @@
-DIST TreeView-1.2.0-src.tar.gz 3176518 BLAKE2B 0e80c2298236fa064d8a36f5cea71d962f1a1b38bf9128bcc964ad44f5c0502d92008e1f5c70a290522763fff356beb01584b02eea0834392df14196f4313c93 SHA512 b2c2d8c2d2e9201fb9877c7014607bd21a946a57159ebda0fb834563e9a8751298e964bd32474bc6f53303727c2a3d03c72869d1485d9656150591c44c26a9b1
-DIST helper-scripts-0.0.2.tar.gz 18260 BLAKE2B 2f794063fa2f9263b92465b48a891efc5ae65ab3a64ade7250aa3a9f166873d9a6f9c5ad69387caa6d9f15affb907cd2b3587e7c261b862337319c0e7d7be9d6 SHA512 6d335ffa4da7db2d5b2d0009e8db87145cc9b3b85772059f6afde55f544de1ee1348a8450e69393ea59313268549204be3d26931dc43085d843ff3c6c3c27d88
diff --git a/sci-biology/jtreeview/jtreeview-1.2.0.ebuild b/sci-biology/jtreeview/jtreeview-1.2.0.ebuild
deleted file mode 100644
index 8f0e777c9..000000000
--- a/sci-biology/jtreeview/jtreeview-1.2.0.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit perl-module java-pkg-2 java-ant-2
-
-DESCRIPTION="Viewer for Microarray Data in PCL or CDT formats"
-HOMEPAGE="http://jtreeview.sourceforge.net/" # no https
-SRC_URI="
- https://sourceforge.net/projects/jtreeview/files/jtreeview/${PV}/TreeView-${PV}-src.tar.gz
- https://sourceforge.net/projects/jtreeview/files/helper-scripts/0.0.2/helper-scripts-0.0.2.tar.gz
-"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64"
-
-DEPEND=">virtual/jdk-1.7:*
- dev-java/nanoxml"
-RDEPEND="${DEPEND}
- >=virtual/jre-1.7:*"
-
-S="${WORKDIR}/TreeView-${PV}-src"
-JAVA_PKG_BSFIX_NAME="${S}"
-
-# TODO: use xltproc to create docs following TreeView-1.1.6r4-src/doc/README
-
-src_install(){
- java-pkg_dojar TreeView.jar
- java-pkg_dolauncher ${PN} TreeView.jar
- cd ../helper-scripts-0.0.2 || die
- perl_set_version
- perl_domodule *.pm
- perl_domodule *.pl
- insinto /usr/share/"${PN}"/examples
- doins blues.color
- newdoc README README.helper-scripts
-}
diff --git a/sci-biology/jtreeview/jtreeview-9999.ebuild b/sci-biology/jtreeview/jtreeview-9999.ebuild
deleted file mode 100644
index 316368b4e..000000000
--- a/sci-biology/jtreeview/jtreeview-9999.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit perl-module java-pkg-2 java-ant-2 git-r3
-
-DESCRIPTION="Viewer for Microarray Data in PCL or CDT formats"
-HOMEPAGE="http://jtreeview.sourceforge.net/" # no https
-EGIT_REPO_URI="https://bitbucket.org/TreeView3Dev/treeview3.git"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS=""
-
-DEPEND=">virtual/jdk-1.7:*"
-RDEPEND="${DEPEND}
- >=virtual/jre-1.7:*"
-
-src_install(){
- java-pkg_dojar TreeView.jar
- java-pkg_dolauncher ${PN} TreeView.jar
- cd ../helper-scripts-0.0.2 || die
- perl_set_version
- perl_domodule *.pm
- perl_domodule *.pl
- insinto /usr/share/"${PN}"/examples
- doins blues.color
- newdoc README README.helper-scripts
-}
diff --git a/sci-biology/jtreeview/metadata.xml b/sci-biology/jtreeview/metadata.xml
deleted file mode 100644
index 5139daeeb..000000000
--- a/sci-biology/jtreeview/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="bitbucket">TreeView3Dev/treeview3</remote-id>
- <remote-id type="sourceforge">jtreeview</remote-id>
- </upstream>
-</pkgmetadata>