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authorS├ębastien Fabbro <sebfabbro@gmail.com>2012-01-14 05:29:33 +0000
committerS├ębastien Fabbro <sebfabbro@gmail.com>2012-01-14 05:29:33 +0000
commitc0ff3c6c91cbfed4417aac81e01e5dd814e1d83d (patch)
tree97ec443d1c5c529a22b681130d71ce30f5e33fc1
parenttweaks to mpich2 (diff)
parentmpich2: add link to upstream report (diff)
downloadsci-c0ff3c6c91cbfed4417aac81e01e5dd814e1d83d.tar.gz
sci-c0ff3c6c91cbfed4417aac81e01e5dd814e1d83d.tar.bz2
sci-c0ff3c6c91cbfed4417aac81e01e5dd814e1d83d.zip
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci
Conflicts: sys-cluster/mpich2/Manifest
-rw-r--r--sci-libs/atlas/Manifest3
-rw-r--r--sys-cluster/mpich2/Manifest16
-rw-r--r--sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild1
3 files changed, 20 insertions, 0 deletions
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index cd7bb1d78..9fff5924f 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -4,11 +4,14 @@ DIST atlas3.9.46.tar.bz2 5572227 RMD160 1fbe0f403fc8a35b2b355edabc756c65c19befa2
DIST atlas3.9.47.tar.bz2 5733559 RMD160 036dbe08784bbda33ce1fa94b20a1999b22772cd SHA1 a3a4797669decea28308bd7d3e0adcac44267471 SHA256 ff4d303c7e3e965cf53f6691e110c1dbff76419c292f56b1ba89e6e5c4174fa0
DIST atlas3.9.49.tar.bz2 5755631 RMD160 b718c3f343d220460427ba2008bd80d8efeb4a71 SHA1 ae2380986f5622f11fb88c4985e3633613a68fc5 SHA256 fbe55e35da9d8d46a01d13af5755145001edc321e5b240bc21b70c55e5c16289
DIST atlas3.9.52.tar.bz2 5427461 RMD160 39d81972153482d2b7e85d3f6b8e07f8949a183d SHA1 3c9e78f9c6ac14d30965a9ce5dad6a38b8422170 SHA256 0376ad5fa51f974c612d51395db588fb8758582c229700b934d905e189d71d99
+DIST atlas3.9.62.tar.bz2 6319634 RMD160 8f09fd9f4d1da67e9d37b6ee03f7eb8903b78d98 SHA1 de68fbcd8ecfcf1c9fa78600443b5b26f67a113a SHA256 8767c7481a883db9286b915aa5a9d6fb7be736352742f610aae1ba6803b52c37
DIST lapack-3.3.1.tgz 4945204 RMD160 5e9d90122110045e07351f3ab30dc4e2b43d52db SHA1 3ce437e05f0e9a3c8148ec41922f6efeef0ebdac SHA256 56821ab51c29369a34e5085728f92c549a9aa926f26acf7eeac87b61eed329e4
+DIST lapack-3.4.0.tgz 6127787 RMD160 42599fbc1e9f943454d243097b043daa51668d4e SHA1 910109a931524f8dcc2734ce23fe927b00ca199f SHA256 a7139ef97004d0e3c4c30f1c52d508fd7ae84b5fbaf0dd8e792c167dc306c3e9
EBUILD atlas-3.8.4.ebuild 7394 RMD160 4d60e4e8437f509e447988ee841da387d57f3b9e SHA1 bcf373b5fd94f2942e9eb1bd799ed782c21bc481 SHA256 48ce05edf409f60d8d1c9d404b021d0fc3d204194774ef097b838c6a7d0fa8ab
EBUILD atlas-3.9.46.ebuild 7396 RMD160 dd985c2b4d8b4fcdd2b41acb851600900b2da74a SHA1 58ffa873126c0cae86761139df14f4ff85c42a45 SHA256 03bb28d219c0dd759c5b68549beee6f6e1800869d1afef8dbe3eace47dce4e61
EBUILD atlas-3.9.47.ebuild 7396 RMD160 dd985c2b4d8b4fcdd2b41acb851600900b2da74a SHA1 58ffa873126c0cae86761139df14f4ff85c42a45 SHA256 03bb28d219c0dd759c5b68549beee6f6e1800869d1afef8dbe3eace47dce4e61
EBUILD atlas-3.9.49.ebuild 7396 RMD160 dd985c2b4d8b4fcdd2b41acb851600900b2da74a SHA1 58ffa873126c0cae86761139df14f4ff85c42a45 SHA256 03bb28d219c0dd759c5b68549beee6f6e1800869d1afef8dbe3eace47dce4e61
EBUILD atlas-3.9.52.ebuild 7396 RMD160 dd985c2b4d8b4fcdd2b41acb851600900b2da74a SHA1 58ffa873126c0cae86761139df14f4ff85c42a45 SHA256 03bb28d219c0dd759c5b68549beee6f6e1800869d1afef8dbe3eace47dce4e61
+EBUILD atlas-3.9.62.ebuild 7429 RMD160 707bbc343daed27997c8f15ed25cecfefc86ae9c SHA1 409a34104ec391c7ffb64c8cf1e65cb62883a726 SHA256 9d91e143b20329e3607384a5d5f65be92da216dcc026ec4497f31256bed67926
MISC ChangeLog 2360 RMD160 281bd2a873bbb8d22c2e0aa2abd120c1d3b86aa9 SHA1 f01d4e21cc612ee273622298cb07bc013f5d80f5 SHA256 8101a54ca40192962f869a09c8d7e0bce08d578cb4feccf710ba1852519a41d9
MISC metadata.xml 617 RMD160 cbafba50b52b844c48932a2f848891b3bb98b5aa SHA1 c086b55d8493b984b461940c14409c9834e5ab5c SHA256 a07a38b4c94dea5acc2c9660f84e01c7e03244ecada1f3c77ada00025af48976
diff --git a/sys-cluster/mpich2/Manifest b/sys-cluster/mpich2/Manifest
index 5f5402260..ef417e0ec 100644
--- a/sys-cluster/mpich2/Manifest
+++ b/sys-cluster/mpich2/Manifest
@@ -1,3 +1,6 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
AUX 0001-MPD_CONF_FILE-should-be-readable.patch 1496 RMD160 33b8db14ab69293a53ecb0192ea7a2a568ee422e SHA1 88cb1d7cc60a1eb7a2a7ea07c8058ebb3318c734 SHA256 747462d1d2272291fd956631cee4170112523027e2b89d4f2abf6d618cc004aa
AUX 0002-mpd_conf_file-search-order.patch 3882 RMD160 90bf46695398bea605002826c7d9b85c7f07e5e9 SHA1 9f20b59f853e13d81f6227ddb16535d76ec4bab3 SHA256 a56c943e68e0bcf69900ae76cb4df73ef19d60f0e9e16e6d75d48b2651324b33
AUX 0003-Fix-pkgconfig-for-mpich2-ch3-v1.2.1.patch 1510 RMD160 8bcd0ec310bcbc13bfd3d0200c1b9f5a88fc4677 SHA1 949da42c2fa90c4a298dc37e0994e97317ae75e9 SHA256 84896b8c127a872fac3a99e9acdb41a2a051275399b186b54349a72d478acb00
@@ -14,6 +17,19 @@ AUX mpich2-hvector.patch 2011 RMD160 1abb8e8872fd7eb4e0c22ca5c499e8dce475a8c0 SH
DIST mpich2-1.2.1p1.tar.gz 18014859 RMD160 810cc486b65e4bcf977ac8d96ccbbcea87e0cbaa SHA1 26bd5620b45bc654aa3945755d11450be63d650c SHA256 a55d1682ee0b5ebbacc047f60620ed291e0a9b3ded3eaeb6a2c81a1598c4c964
DIST mpich2-1.4.1p1.tar.gz 19502854 RMD160 1d355cc07b8675af77b1c255fd10696844447298 SHA1 8dcc8888fb27232eb8f76c11cc890f1c3c483804 SHA256 a20f798ceaad6b0161ddecac98623b65d6a4033072f39ced13b9043916e3d1ee
EBUILD mpich2-1.2.1_p1-r2.ebuild 5030 RMD160 b947f8a8fa374d4e49a407d212a61fdd20986e61 SHA1 264fa061d136685befd2637272510b2298f05ccb SHA256 48abd33f82ce7728c4fe2010c58fce7718e0e50ff0242f4d44d4781532a51a43
+<<<<<<< HEAD
EBUILD mpich2-1.4.1_p1.ebuild 4714 RMD160 a49b7faa577677ee339e61d289aa44018d5a4418 SHA1 36684e8346a54050e2150cadc03d051d414daca8 SHA256 e091de691c7c7fddb619cc6bc44c759866b2302998424fd6e9621fb7d7bb1848
MISC ChangeLog 5728 RMD160 c305f9e20d011642a1f21f24faf80aad982121d3 SHA1 b535528c38702ff0c4f7d4788afac2732b4ac95b SHA256 221798a06f715aa9c2503093cc46d794cdbc37f9256e9a304e7d1a9f6e538ac2
MISC metadata.xml 534 RMD160 8d4fa7f5f4860a520e58b3866b2a2fdc04ab6d83 SHA1 60bc1b41a847e2f9fbf527b204fcafc054d04d33 SHA256 763dc9199c817bb987335dcdddcc65de5f419410aac2f027fc9a2208e91f5c0a
+=======
+EBUILD mpich2-1.4.1_p1.ebuild 4779 RMD160 08f5cffd53be5fb3b34758421f408e4196c7a15d SHA1 510cf9c9a48bea54bb4573ac477aecd9ca4f8362 SHA256 c02772bf6fa2e1394691647c3f7d3297c6f451764d54fc994a15de99485531af
+MISC ChangeLog 5601 RMD160 d8a414adb8883087a573543384ee25bb31695058 SHA1 cd7ed83163270871c38c17f315b1b0a45571a86e SHA256 85661b314d33580146a6d46118cc0b7dab1d364674c01a4c631ce801c82fc87e
+MISC metadata.xml 534 RMD160 8d4fa7f5f4860a520e58b3866b2a2fdc04ab6d83 SHA1 60bc1b41a847e2f9fbf527b204fcafc054d04d33 SHA256 763dc9199c817bb987335dcdddcc65de5f419410aac2f027fc9a2208e91f5c0a
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.17 (GNU/Linux)
+
+iEYEARECAAYFAk8NyWQACgkQ4MrvBE1wQ8l53gCeK19kDUNZSiJUfAi4Vdybx5iv
+wx0An2hpRar8mlP5JwNbA6MFRREgrhKM
+=3nzZ
+-----END PGP SIGNATURE-----
+>>>>>>> a19ee9358dcfb3269bb741cb6e45e533e1ee5d3f
diff --git a/sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild b/sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild
index 6853722be..663d685b7 100644
--- a/sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild
+++ b/sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild
@@ -140,6 +140,7 @@ src_test() {
sed -i '/^[# ]*non_zero_root/d' test/mpi/perf/testlist || die
# Failing tests based on requiring MPI_THREAD_MULTIPLE.
+ # http://lists.mcs.anl.gov/pipermail/mpich-discuss/2012-January/011618.html
sed -i \
-e '/^[# ]*pt2pt/d' \
-e '/^[# ]*comm/d' \