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authorSébastien Fabbro <bicatali@gentoo.org>2014-05-12 12:25:39 -0700
committerSébastien Fabbro <bicatali@gentoo.org>2014-05-12 12:25:39 -0700
commitc53b06a989ec9c366652c58a9b63bb7a125b1395 (patch)
treecd9ae3b8f07f973b06f31b7e5cac0eb29a0bef5a
parentMerge branch 'master' of ssh://github.com/gentoo-science/sci (diff)
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mumps now in main tree
-rw-r--r--sci-libs/mumps/ChangeLog43
-rw-r--r--sci-libs/mumps/Manifest1
-rw-r--r--sci-libs/mumps/metadata.xml18
-rw-r--r--sci-libs/mumps/mumps-4.10.0-r2.ebuild184
4 files changed, 0 insertions, 246 deletions
diff --git a/sci-libs/mumps/ChangeLog b/sci-libs/mumps/ChangeLog
deleted file mode 100644
index 46b5d6d03..000000000
--- a/sci-libs/mumps/ChangeLog
+++ /dev/null
@@ -1,43 +0,0 @@
-# ChangeLog for sci-libs/mumps
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 17 Jun 2013; Justin Bronder <jsbronder@gentoo.org> mumps-4.10.0-r2.ebuild:
- Don't let openmpi override malloc, works around sandbox issue in #462602
-
-*mumps-4.10.0-r2 (11 Dec 2012)
-
- 11 Dec 2012; Sébastien Fabbro <bicatali@gentoo.org> +mumps-4.10.0-r2.ebuild,
- -mumps-4.10.0-r1.ebuild, metadata.xml:
- sci-libs/mumps: Install libpord, force -j1 on makefile because of random
- parallel build failures, separate dummy sequential mpi library from the common
- mumps library
-
- 15 Jul 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0-r1.ebuild:
- sci-libs/mumps: Merge dummy sequential mpi into sequential mumps
-
- 13 Jul 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0.ebuild:
- sci-libs/mumps: fix underlinking for sequential library
-
- 12 Jul 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0.ebuild:
- sci-libs/mumps: Shared library fixes and prefix love
-
- 12 Jul 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0.ebuild:
- sci-libs/mumps: prefix love
-
- 13 Mar 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0.ebuild,
- metadata.xml:
- Fixed for sequential (non mpi) libraries
-
- 12 Mar 2012; Sébastien Fabbro <bicatali@gentoo.org> mumps-4.10.0.ebuild:
- Only allow earlier parmetis versions
-
- 12 Mar 2012; Sébastien Fabbro <bicatali@gentoo.org> +mumps-4.10.0.ebuild,
- +metadata.xml:
- metis-mpi is now parmetis
-
-*mumps-4.10.0 (01 Jun 2011)
-
- 01 Jun 2011; Sébastien Fabbro <bicatali@gentoo.org> +mumps-4.10.0.ebuild,
- +metadata.xml:
- Initial import
diff --git a/sci-libs/mumps/Manifest b/sci-libs/mumps/Manifest
deleted file mode 100644
index 1e9601e52..000000000
--- a/sci-libs/mumps/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST MUMPS_4.10.0.tar.gz 2481516 SHA256 d0f86f91a74c51a17a2ff1be9c9cee2338976f13a6d00896ba5b43a5ca05d933 SHA512 348df048618ea2086fbe805a90f2e31f57e0db4aa6f4843a0e3c7142bac80fe45e54768e65921657c970bc286b59c2bca91e5006ed8000678f26ba2efe2bfda8 WHIRLPOOL 268a22811395b0a193eed90798ede8bc1a1478da25354711fbc8a220b5cfc3af78e0aedff787deb1592871ff450835533e1266393592056228fa8685f51f13fd
diff --git a/sci-libs/mumps/metadata.xml b/sci-libs/mumps/metadata.xml
deleted file mode 100644
index 3aa8aad22..000000000
--- a/sci-libs/mumps/metadata.xml
+++ /dev/null
@@ -1,18 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-<longdescription lang='en'>
- MUltifrontal Massively Parallel sparse direct Solver implements a
- direct solver for large sparse linear systems, with a particular
- focus on symmetric positive definite matrices. It can operate on
- distributed matrices e.g. over a cluster. It has Fortran and C
- interfaces, and can interface with ordering tools such
- as Scotch or Metis.
-</longdescription>
-<use>
- <flag name="metis">Enable matrix ordering with METIS
- (<pkg>sci-libs/metis</pkg>, <pkg>sci-libs/parmetis</pkg>)</flag>
- <flag name="scotch">Enable matrix ordering with <pkg>sci-libs/scotch</pkg></flag>
-</use>
-</pkgmetadata>
diff --git a/sci-libs/mumps/mumps-4.10.0-r2.ebuild b/sci-libs/mumps/mumps-4.10.0-r2.ebuild
deleted file mode 100644
index dc27d83ff..000000000
--- a/sci-libs/mumps/mumps-4.10.0-r2.ebuild
+++ /dev/null
@@ -1,184 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=4
-inherit eutils toolchain-funcs flag-o-matic versionator fortran-2 multilib
-
-MYP=MUMPS_${PV}
-
-DESCRIPTION="MUltifrontal Massively Parallel sparse direct matrix Solver"
-HOMEPAGE="http://mumps.enseeiht.fr/"
-SRC_URI="${HOMEPAGE}${MYP}.tar.gz"
-
-LICENSE="public-domain"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples metis mpi +scotch static-libs"
-
-RDEPEND="
- virtual/blas
- metis? ( || ( sci-libs/metis <sci-libs/parmetis-4 )
- mpi? ( <sci-libs/parmetis-4 ) )
- scotch? ( sci-libs/scotch[mpi=] )
- mpi? ( virtual/scalapack )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}/${MYP}"
-
-static_to_shared() {
- local libstatic=${1}; shift
- local libname=$(basename ${libstatic%.a})
- local soname=${libname}$(get_libname $(get_version_component_range 1-2))
- local libdir=$(dirname ${libstatic})
-
- einfo "Making ${soname} from ${libstatic}"
- if [[ ${CHOST} == *-darwin* ]] ; then
- ${LINK:-$(tc-getCC)} ${LDFLAGS} \
- -dynamiclib -install_name "${EPREFIX}"/usr/lib/"${soname}" \
- -Wl,-all_load -Wl,${libstatic} \
- "$@" -o ${libdir}/${soname} || die "${soname} failed"
- else
- ${LINK:-$(tc-getCC)} ${LDFLAGS} \
- -shared -Wl,-soname=${soname} \
- -Wl,--whole-archive ${libstatic} -Wl,--no-whole-archive \
- "$@" -o ${libdir}/${soname} || die "${soname} failed"
- [[ $(get_version_component_count) -gt 1 ]] && \
- ln -s ${soname} ${libdir}/${libname}$(get_libname $(get_major_version))
- ln -s ${soname} ${libdir}/${libname}$(get_libname)
- fi
-}
-
-src_prepare() {
- sed -e "s:^\(CC\s*=\).*:\1$(tc-getCC):" \
- -e "s:^\(FC\s*=\).*:\1$(tc-getFC):" \
- -e "s:^\(FL\s*=\).*:\1$(tc-getFC):" \
- -e "s:^\(AR\s*=\).*:\1$(tc-getAR) cr :" \
- -e "s:^\(RANLIB\s*=\).*:\1$(tc-getRANLIB):" \
- -e "s:^\(LIBBLAS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs blas):" \
- -e "s:^\(INCPAR\s*=\).*:\1:" \
- -e 's:^\(LIBPAR\s*=\).*:\1$(SCALAP):' \
- -e "s:^\(OPTF\s*=\).*:\1${FFLAGS} -DALLOW_NON_INIT \$(PIC):" \
- -e "s:^\(OPTC\s*=\).*:\1${CFLAGS} \$(PIC):" \
- -e "s:^\(OPTL\s*=\).*:\1${LDFLAGS}:" \
- Make.inc/Makefile.inc.generic > Makefile.inc || die
- # fixed a missing copy of libseq to libdir
-}
-
-src_configure() {
- LIBADD="$($(tc-getPKG_CONFIG) --libs blas) -Llib -lpord"
- local ord="-Dpord"
- if use metis && use mpi; then
- sed -i \
- -e "s:#\s*\(LMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs parmetis):" \
- -e "s:#\s*\(IMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --cflags parmetis):" \
- Makefile.inc || die
- LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs parmetis)"
- ord="${ord} -Dparmetis"
- elif use metis; then
- sed -i \
- -e "s:#\s*\(LMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs metis):" \
- -e "s:#\s*\(IMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --cflags metis):" \
- Makefile.inc || die
- LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs metis)"
- ord="${ord} -Dmetis"
- fi
- if use scotch && use mpi; then
- sed -i \
- -e "s:#\s*\(LSCOTCH\s*=\).*:\1-lptesmumps -lptscotch -lptscotcherr:" \
- -e "s:#\s*\(ISCOTCH\s*=\).*:\1-I${EROOT}usr/include/scotch:" \
- Makefile.inc || die
- LIBADD="${LIBADD} -lptesmumps -lptscotch -lptscotcherr"
- ord="${ord} -Dptscotch"
- elif use scotch; then
- sed -i \
- -e "s:#\s*\(LSCOTCH\s*=\).*:\1-lesmumps -lscotch -lscotcherr:" \
- -e "s:#\s*\(ISCOTCH\s*=\).*:\1-I${EROOT}usr/include/scotch:" \
- Makefile.inc || die
- LIBADD="${LIBADD} -lesmumps -lscotch -lscotcherr"
- ord="${ord} -Dscotch"
- fi
- if use mpi; then
- sed -i \
- -e "s:^\(CC\s*=\).*:\1mpicc:" \
- -e "s:^\(FC\s*=\).*:\1mpif90:" \
- -e "s:^\(FL\s*=\).*:\1mpif90:" \
- -e "s:^\(SCALAP\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs scalapack):" \
- Makefile.inc || die
- export LINK=mpif90
- LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs scalapack)"
- else
- sed -i \
- -e 's:-Llibseq:-L$(topdir)/libseq:' \
- -e 's:PAR):SEQ):g' \
- -e "s:^\(SCALAP\s*=\).*:\1:" \
- -e 's:^LIBSEQNEEDED =:LIBSEQNEEDED = libseqneeded:g' \
- Makefile.inc || die
- export LINK="$(tc-getFC)"
- fi
- sed -i -e "s:^\s*\(ORDERINGSF\s*=\).*:\1 ${ord}:" Makefile.inc || die
-}
-
-src_compile() {
- # Workaround #462602
- export FAKEROOTKEY=1
-
- # -j1 because of static archive race
- emake -j1 alllib PIC="-fPIC"
- if ! use mpi; then
- #$(tc-getAR) crs lib/libmumps_common.a libseq/*.o || die
- LIBADD+=" -Llibseq -lmpiseq"
- static_to_shared libseq/libmpiseq.a
- fi
- static_to_shared lib/libpord.a ${LIBADD}
- static_to_shared lib/libmumps_common.a ${LIBADD}
-
- local i
- for i in c d s z; do
- static_to_shared lib/lib${i}mumps.a -Llib -lmumps_common ${LIBADD}
- done
- if use static-libs; then
- emake clean
- emake -j1 alllib
- fi
-}
-
-src_test() {
- emake all
- local dotest
- if use mpi; then
- dotest="mpirun -np 2"
- else
- export LD_LIBRARY_PATH="${S}/libseq:${LD_LIBRARY_PATH}"
- fi
- cd examples
- ${dotest} ./ssimpletest < input_simpletest_real || die
- ${dotest} ./dsimpletest < input_simpletest_real || die
- ${dotest} ./csimpletest < input_simpletest_cmplx || die
- ${dotest} ./zsimpletest < input_simpletest_cmplx || die
- einfo "The solutions should be close to (1,2,3,4,5)"
- ${dotest} ./c_example || die
- einfo "The solution should be close to (1,2)"
- make clean
-}
-
-src_install() {
- dolib.so lib/lib*$(get_libname)*
- use static-libs && dolib.a lib/lib*.a
- insinto /usr
- doins -r include
- if ! use mpi; then
- dolib.so libseq/lib*$(get_libname)*
- insinto /usr/include/mpiseq
- doins libseq/*.h
- use static-libs && dolib.a libseq/libmpiseq.a
- fi
- dodoc README ChangeLog VERSION
- use doc && dodoc doc/*.pdf
- if use examples; then
- insinto /usr/share/doc/${PF}
- doins -r examples
- fi
-}