[sci-chemistry/gromacs]: added missing patch

(Portage version: 2.1.8.3/git/Linux i686)
 (Signed Manifest commit)

4 files changed, 54 insertions, 2 deletions

diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index 341f7bbc8..9cf3fa6bd 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  28 Jun 2010; Christoph Junghans <kleiner_otti@gmx.de>
+  gromacs-4.0.9999.ebuild, +files/gromacs-4.0.9999-docdir.patch:
+  docdir patch is still not in 4.0 branch
+
 *gromacs-4.0.7-r3 (22 Jun 2010)
 
   22 Jun 2010; Christoph Junghans <kleiner_otti@gmx.de>
diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest
index 3901fa2c9..e1ef7c8d1 100644
--- a/sci-chemistry/gromacs/Manifest
+++ b/sci-chemistry/gromacs/Manifest
@@ -1,8 +1,19 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 AUX gromacs-4.0.9999-ccache.patch 678 RMD160 043d0e207e04a275fe00a3bd2b28f8dc0dfd4b7f SHA1 08bc5ac8bc0b28f68e1ede994d49616dd920af5d SHA256 ca477d54351c418f1d39dda29373a1426c9403ec0d2f21c28fc7568227d47632
 AUX gromacs-4.0.9999-configure-gfortran.patch 760 RMD160 1700579b0c2dfb8cbb743d795aa9f0f9f467c06b SHA1 e6924d3598b20195fcb6809e64f333def5b0f919 SHA256 1a59dfde8a3db8db729bd19691a5945e02be2725fa66ec0b125ab3b931518761
+AUX gromacs-4.0.9999-docdir.patch 1352 RMD160 336ab23b4b65430caf3205650a8787e8e33d2137 SHA1 77e0cc966c4d755f603b2d0ab9a075c0ee6b7361 SHA256 8ead457b06f7f943455a95494be4648e539934699d29e955d2e05ac02f1ca4ef
 DIST gmxtest-4.0.4.tgz 14845017 RMD160 c7c583415438bdef4c9996da9064254e9460cf16 SHA1 998179aa2bfbc4f80514f10ed774762f85c854c3 SHA256 6a7f787f4bb7cbecb688115ff0854a5ffd2ef33487d7bce4b031e63848b6f361
 DIST manual-4.0.pdf 2135100 RMD160 b963642f8e1433f11328c3d0c4b1645c9de506da SHA1 8ae951ee15b2a7dc626331fce36511bc8766144c SHA256 646f810477eee2d710de6019c52056550413d0ba77baf9680195c835ddafe80a
-EBUILD gromacs-4.0.9999.ebuild 6916 RMD160 38eb196cb6ae5e6c66cacbf9d9fbccdb05993bf9 SHA1 91bb1d5314f41249b6e58057c0226f0a06372325 SHA256 4429c40a1b53663bcefb3ab6defbd40aced9d444f022ad3261408875bacabdd1
+EBUILD gromacs-4.0.9999.ebuild 6956 RMD160 d06b05afc8efa80c1d7e22fe736cf28fe7816c88 SHA1 ebf307e9cab582497c8f12c6815baa3a4f2e3baa SHA256 19ecebce2b8d2e4882b7ed3da86d8e08f5ff051ec19593a0355204cc6f33c4c4
 EBUILD gromacs-9999.ebuild 6506 RMD160 b643bf8e8ccc04c1262d7af10b474d348e1b51a9 SHA1 d421d72389ce6dd24fd434382c89be804db9f6d4 SHA256 8cabb39573168ae971a13c605fbd5532fe6975be207f5812c0675007812c5322
-MISC ChangeLog 4053 RMD160 6f4f1e612ae4596b4ba09a7b781111816df5bde6 SHA1 16fe830d0e94f2fdce671a9c66e3e8470633549e SHA256 b873ec88874222a9d51a78a4838bf57a1fe623ede273746d13f924a4f78dde4b
+MISC ChangeLog 4217 RMD160 84a674820581ba7141d27276b0d0fd163a12f0a6 SHA1 55f58fd696c3c2d6733be0724a5d4ae9d64a3f8f SHA256 cbfd9e1f3d23976749e5ced121d40ad6ed51654836f577ab175d4b845df9d896
 MISC metadata.xml 643 RMD160 e9ffc42d792f15f3d4438a0de225277ec4814041 SHA1 c83fd4a32d896b7a2586667bc684d46f9daf8693 SHA256 177885ec674e8630a9c9451a0e0a35fc83615b39b387a67002e27f1b0d6b19b2
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.14 (GNU/Linux)
+
+iEYEARECAAYFAkwojL4ACgkQy0OE/ans1/nYCgCfdUaIPB3phaEBEyWvjeotHqW/
+4IAAn1k7nrjMuINTEav2GXrzJCLuBRZf
+=q2t5
+-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/gromacs/files/gromacs-4.0.9999-docdir.patch b/sci-chemistry/gromacs/files/gromacs-4.0.9999-docdir.patch
new file mode 100644
index 000000000..e32ddec90
--- /dev/null
+++ b/sci-chemistry/gromacs/files/gromacs-4.0.9999-docdir.patch
@@ -0,0 +1,36 @@
+diff -Naur gromacs-4.0.5.orig/share/html/Makefile.am gromacs-4.0.5/share/html/Makefile.am
+--- gromacs-4.0.5.orig/share/html/Makefile.am	2006-03-06 10:52:20.000000000 +0100
++++ gromacs-4.0.5/share/html/Makefile.am	2009-11-29 22:27:24.000000000 +0100
+@@ -4,7 +4,7 @@
+ #
+ SUBDIRS = .  images  online
+ 
+-htmldir = ${pkgdatadir}/html
++htmldir = @htmldir@/html
+ 
+ html_DATA = online.html gmxfaq.html
+ 
+diff -Naur gromacs-4.0.5.orig/share/html/images/Makefile.am gromacs-4.0.5/share/html/images/Makefile.am
+--- gromacs-4.0.5.orig/share/html/images/Makefile.am	2006-03-06 10:52:20.000000000 +0100
++++ gromacs-4.0.5/share/html/images/Makefile.am	2009-11-29 23:00:57.000000000 +0100
+@@ -2,7 +2,7 @@
+ #
+ # Don't edit - this file is generated automatically from Makefile.am
+ #
+-imagedir = ${pkgdatadir}/html/images
++imagedir = @htmldir@/html/images
+ 
+ image_DATA = \
+ 	features.gif					\
+diff -Naur gromacs-4.0.5.orig/share/html/online/Makefile.am gromacs-4.0.5/share/html/online/Makefile.am
+--- gromacs-4.0.5.orig/share/html/online/Makefile.am	2008-08-11 11:46:17.000000000 +0200
++++ gromacs-4.0.5/share/html/online/Makefile.am	2009-11-29 23:01:47.000000000 +0100
+@@ -2,7 +2,7 @@
+ #
+ # Don't edit - this file is generated automatically from Makefile.am
+ #
+-onlinedir = ${pkgdatadir}/html/online
++onlinedir = @htmldir@/html/online
+ 
+ online_DATA = \
+   cpt.html	\
diff --git a/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild b/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
index 9126620a1..346bc8bfe 100644
--- a/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
+++ b/sci-chemistry/gromacs/gromacs-4.0.9999.ebuild
@@ -40,6 +40,7 @@ RESTRICT="test"
 
 src_prepare() {
 
+	epatch "${FILESDIR}/${P}-docdir.patch"
 	epatch "${FILESDIR}/${P}-ccache.patch"
 	# Fix typos in a couple of files.
 	sed -e "s:+0f:-f:" -i share/tutor/gmxdemo/demo \