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authorJustin Lecher <jlec@gentoo.org>2012-07-19 12:33:47 +0200
committerJustin Lecher <jlec@gentoo.org>2012-07-19 12:33:47 +0200
commitd9e9d16787dcaf81757e6426adbf5d20dca43c7e (patch)
treeb05d5eb8c3ec8f377e452ce4e83905718d0f0753
parentfixed description (diff)
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InCvs
-rw-r--r--sci-biology/picard-tools/Manifest1
-rw-r--r--sci-biology/picard-tools/metadata.xml9
-rw-r--r--sci-biology/picard-tools/picard-tools-1.40.ebuild23
3 files changed, 0 insertions, 33 deletions
diff --git a/sci-biology/picard-tools/Manifest b/sci-biology/picard-tools/Manifest
deleted file mode 100644
index 93c7246c2..000000000
--- a/sci-biology/picard-tools/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST picard-tools-1.40.zip 8324135 RMD160 8542e69357bca501d9fd08715765fc68b938c376 SHA1 dc66d3b4b6b0c4009f1dab32a3e4c27190dae084 SHA256 f38a08001dbfbbb105e7361048af3f6a4b77fc0247ce953836cc1effb8f04863
diff --git a/sci-biology/picard-tools/metadata.xml b/sci-biology/picard-tools/metadata.xml
deleted file mode 100644
index 07b525505..000000000
--- a/sci-biology/picard-tools/metadata.xml
+++ /dev/null
@@ -1,9 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <herd>sci-biology</herd>
- <maintainer>
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-</pkgmetadata>
diff --git a/sci-biology/picard-tools/picard-tools-1.40.ebuild b/sci-biology/picard-tools/picard-tools-1.40.ebuild
deleted file mode 100644
index 5d8b77348..000000000
--- a/sci-biology/picard-tools/picard-tools-1.40.ebuild
+++ /dev/null
@@ -1,23 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=3
-
-DESCRIPTION="Java-based command-line utilities manipulating SAM/BAM files with Java API (SAM-JDK)"
-HOMEPAGE="http://picard.sourceforge.net/index.shtml"
-SRC_URI="http://sourceforge.net/projects/picard/files/picard-tools/1.40/picard-tools-1.40.zip"
-
-LICENSE="Apache-2.0 MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-# TODO: maybe better set set CLASSPATH=/whatever/av.jar:/whatever/sam-1.09.jar
-src_install(){
- insinto "${DESTDIR}"/usr/share/"${PN}"/lib
- doins *.jar || die "dobin failed"
-}