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authorChristoph Junghans <kleiner_otti@gmx.de>2010-10-21 21:11:02 +0200
committerChristoph Junghans <kleiner_otti@gmx.de>2010-10-21 21:11:02 +0200
commitda83ac38ba882ab2cc5ce36dfbe35a32d9b9b1cd (patch)
treef1ec99ab8cb3f62397f1a650ede49eea10ad417a
parentsci-mathematics/normaliz QA (diff)
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[sci-chemistry/gromacs] added vmd use flag
(Portage version: 2.1.8.3/git/Linux i686) (Signed Manifest commit)
-rw-r--r--sci-chemistry/gromacs/ChangeLog4
-rw-r--r--sci-chemistry/gromacs/Manifest12
-rw-r--r--sci-chemistry/gromacs/gromacs-4.5.9999.ebuild6
-rw-r--r--sci-chemistry/gromacs/metadata.xml1
4 files changed, 16 insertions, 7 deletions
diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index b420cd88b..b0bcc9155 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 21 Oct 2010; Christoph Junghans <kleiner_otti@gmx.de>
+ gromacs-4.5.9999.ebuild, metadata.xml:
+ added vmd use flag
+
17 Oct 2010; Christoph Junghans <kleiner_otti@gmx.de>
gromacs-4.0.7-r5.ebuild, gromacs-4.0.9999.ebuild:
rename manual in distfiles
diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest
index b029444ab..e0208a223 100644
--- a/sci-chemistry/gromacs/Manifest
+++ b/sci-chemistry/gromacs/Manifest
@@ -10,14 +10,14 @@ DIST gromacs-manual-4.0.pdf 2135100 RMD160 b963642f8e1433f11328c3d0c4b1645c9de50
DIST gromacs-manual-4.5.pdf 2445884 RMD160 65548f56a71697128ab44cae59d5b7997c86fbdb SHA1 1a6ff8fb56873eccfa03b104770a136e0befe298 SHA256 028cb5b150185157a7d93849c0c1f8e442c41c942932ffbf0530ef1774e66449
EBUILD gromacs-4.0.7-r5.ebuild 9480 RMD160 f172dac014fc931dc23d14c0466019b858d81637 SHA1 687eaa885b6b88f38f2607d98f40f689ecfe747c SHA256 e84d65116bfbfd437e457b901b98d176de5cc69fa6a3d5fc3b3bb43a31bb42f1
EBUILD gromacs-4.0.9999.ebuild 9367 RMD160 fa9e3db1d2a292a21d7cf15bf14fc9f7475ea0cc SHA1 a6feb465752a155160701b3a6832c796aaf1049f SHA256 608ef3c08895702eaaa45e1a9a186037b76b0ea0c5c117fa3782bdb02a8d3664
-EBUILD gromacs-4.5.9999.ebuild 7691 RMD160 46a860ebfd14d78cdd3b56ac93997ee95679ab38 SHA1 cd920c8560539456f2f1ca44c82ad66662e38da6 SHA256 a89cc12ed66b670fcbcc1d7635399819fb44960228ec0cdd46bc0acbff54df91
+EBUILD gromacs-4.5.9999.ebuild 7849 RMD160 624bcb8759c86ff36547bc950cfdd0489af728e5 SHA1 dcd92ee48ec8552ecb0f145eb764c6fa93b7efea SHA256 2ed37d996d20260568e35f49eeecf063fa029e4bb6057301ea474223a8f31f61
EBUILD gromacs-9999.ebuild 7988 RMD160 dd1638441617d2eaad02b89a7656ba900ddc6aee SHA1 9a672261bdcb37da1169c33f49628c40f52d683c SHA256 9265b2460704ecd0ab8923294a8318ec1f06bdb65962538004af668d519dd029
-MISC ChangeLog 6182 RMD160 3d6dd2ca05c72b55e0c57931e97e18156a42883b SHA1 f7dd67c3458ab979265c56e70848178e17c3ed37 SHA256 56d8bea93fd41c1e2059223c2a60d55dd72c24cea2ef5845d511afac23c1343c
-MISC metadata.xml 643 RMD160 e9ffc42d792f15f3d4438a0de225277ec4814041 SHA1 c83fd4a32d896b7a2586667bc684d46f9daf8693 SHA256 177885ec674e8630a9c9451a0e0a35fc83615b39b387a67002e27f1b0d6b19b2
+MISC ChangeLog 6301 RMD160 dbdcff65d7b4ac5d960dcc12ce83656f65c5f6d1 SHA1 523ee2940965f3116b7eaac6734ea81160767147 SHA256 bc7c7f685abdb59f15ed5b802d1143ddf57e2a70788651ab1838948a8dcb7da4
+MISC metadata.xml 722 RMD160 6a23c5a051b70ecf2475163c378cb52476d2f7cb SHA1 670c9f45adcccefbcf78fb6a05bfd75d877ff126 SHA256 ee0c361abcfd8d738c0e92213db03e1e81c90289768ed585efcb0e430250a890
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.16 (GNU/Linux)
-iEYEARECAAYFAky61/0ACgkQy0OE/ans1/n8KwCfeyduhFS0ioataD9J8JSJF7+U
-gOAAnjfDKJnt3PJzdc+dp7pNDiTkp2FI
-=z2Cl
+iEYEARECAAYFAkzAkEYACgkQy0OE/ans1/ksWgCfd9DNZX1fpjiNU3RANm21fkdR
+WTgAniMCCRvnUuI3FDysmC/oPmn6Jc1H
+=bh45
-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild b/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
index 71ae03857..b8f9428de 100644
--- a/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
+++ b/sci-chemistry/gromacs/gromacs-4.5.9999.ebuild
@@ -23,7 +23,7 @@ LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~alpha ~amd64 ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux"
IUSE="X blas dmalloc doc -double-precision +fftw fkernels +gsl lapack
-mpi +single-precision static static-libs test +threads +xml zsh-completion"
+mpi +single-precision static static-libs test +threads vmd +xml zsh-completion"
DEPEND="app-shells/tcsh
X? ( x11-libs/libX11
@@ -35,6 +35,7 @@ DEPEND="app-shells/tcsh
gsl? ( sci-libs/gsl )
lapack? ( virtual/lapack )
mpi? ( virtual/mpi )
+ vmd? ( sci-chemistry/vmd )
xml? ( dev-libs/libxml2 )"
RDEPEND="${DEPEND}"
@@ -152,6 +153,7 @@ src_configure() {
$(use_with fftw fft fftw3) \
$(use_with gsl) \
$(use_with X x) \
+ $(use_with vmd dlopen) \
$(use_with xml) \
$(use_enable threads) \
${myconf}"
@@ -228,6 +230,8 @@ src_install() {
done
sed -n -e '/^GMXBIN/,/^GMXDATA/p' "${ED}"/usr/bin/GMXRC.bash > "${T}/80gromacs"
+ use vmd && echo "VMD_PLUGIN_PATH=${EPREFIX}/usr/lib/vmd/plugins/*/molfile/" >> "${T}/80gromacs"
+
doenvd "${T}/80gromacs"
rm -f "${ED}"/usr/bin/GMXRC*
diff --git a/sci-chemistry/gromacs/metadata.xml b/sci-chemistry/gromacs/metadata.xml
index c0e0dfc97..dc60ef14d 100644
--- a/sci-chemistry/gromacs/metadata.xml
+++ b/sci-chemistry/gromacs/metadata.xml
@@ -10,5 +10,6 @@
that dont have assembly loops</flag>
<flag name='single-precision'>Single precision version of gromacs</flag>
<flag name='zsh-completion'>Enable zsh completion support</flag>
+ <flag name='vmd'>Enable suppoort for sci-chemistry/md molfile plugins</flag>
</use>
</pkgmetadata>