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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2014-03-25 11:46:02 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2014-03-25 11:46:02 +0100 |
| commit | db87525a418029e3903315e6c4e74c28e385999a (patch) | |
| tree | fecb59d92d9a3bc44b07f4c61ed4e8ac69dfc25b | |
| parent | Merge remote-tracking branch 'github/master' (diff) | |
| download | sci-db87525a418029e3903315e6c4e74c28e385999a.tar.gz sci-db87525a418029e3903315e6c4e74c28e385999a.tar.bz2 sci-db87525a418029e3903315e6c4e74c28e385999a.zip | |
sci-biology/cutadapt: switch to use newer source code location, add support for github snapshots, version bump
| -rw-r--r-- | sci-biology/cutadapt/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/cutadapt/cutadapt-1.2.1.ebuild | 11 | ||||
| -rw-r--r-- | sci-biology/cutadapt/cutadapt-1.4.1.ebuild | 25 | ||||
| -rw-r--r-- | sci-biology/cutadapt/cutadapt-9999.ebuild | 25 |
4 files changed, 60 insertions, 2 deletions
diff --git a/sci-biology/cutadapt/Manifest b/sci-biology/cutadapt/Manifest index d1f5dc4ae..35cd9efd5 100644 --- a/sci-biology/cutadapt/Manifest +++ b/sci-biology/cutadapt/Manifest @@ -1 +1,2 @@ DIST cutadapt-1.2.1.tar.gz 104440 SHA256 1baf91c7351ee3464cd01a7f767fe474675ab1b1f7bb110ffe3722e8126ed5cf SHA512 5cd48f342ed75d18780ec63c73f2c42d239253d8dded3161c39f7a26e915f195055c8c4097305246a1418f8b4d3c8853adc1074cbe2a9c1a1b0af644e36771b6 WHIRLPOOL b5c6ceb65be0fcfe418b31cb4c2f8b427d017f71eed182585dc4353079df21ba2ae16354bb6cfcc17bfb39d155ae87fc97fed55b3d0f6ebc68197d98c395c31e +DIST cutadapt-1.4.1.tar.gz 152401 SHA256 841159772863d9e23647884075e9b12ff284d0942a926be3016c841f2348b6b3 SHA512 1e327f1ee52c7084f4ee986181322278cf03163b483d4deeba721ec606804304dea2770b816a876e5fc280ab960f03c03e57ae7ed83856dc0c25d1ee272862c9 WHIRLPOOL e7db7e3155fa04dd49186edf25aeb483f91405e70fbbf7711d23ca8f6d7c815bea06718d516535e3236847260208542caccf14aa23c7d184ac3ddcde8ff13dc7 diff --git a/sci-biology/cutadapt/cutadapt-1.2.1.ebuild b/sci-biology/cutadapt/cutadapt-1.2.1.ebuild index 232fd4adf..985fa125a 100644 --- a/sci-biology/cutadapt/cutadapt-1.2.1.ebuild +++ b/sci-biology/cutadapt/cutadapt-1.2.1.ebuild @@ -8,11 +8,18 @@ PYTHON_COMPAT=( python{2_6,2_7} ) inherit distutils-r1 +[ "$PV" == "9999" ] && inherit git-2 + DESCRIPTION="Remove adapter sequences from high-throughput sequencing data" HOMEPAGE="https://code.google.com/p/cutadapt/" -SRC_URI="https://cutadapt.googlecode.com/files/"${PN}"-"${PV}".tar.gz" +if [ "$PV" == "9999" ]; then + EGIT_REPO_URI="https://github.com/marcelm/cutadapt" + KEYWORDS="" +else + SRC_URI="https://pypi.python.org/packages/source/c/cutadapt/"${PN}"-"${PV}".tar.gz" + KEYWORDS="~amd64 ~x86" +fi LICENSE="MIT" SLOT="0" -KEYWORDS="~amd64 ~x86" IUSE="" diff --git a/sci-biology/cutadapt/cutadapt-1.4.1.ebuild b/sci-biology/cutadapt/cutadapt-1.4.1.ebuild new file mode 100644 index 000000000..985fa125a --- /dev/null +++ b/sci-biology/cutadapt/cutadapt-1.4.1.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +PYTHON_COMPAT=( python{2_6,2_7} ) + +inherit distutils-r1 + +[ "$PV" == "9999" ] && inherit git-2 + +DESCRIPTION="Remove adapter sequences from high-throughput sequencing data" +HOMEPAGE="https://code.google.com/p/cutadapt/" +if [ "$PV" == "9999" ]; then + EGIT_REPO_URI="https://github.com/marcelm/cutadapt" + KEYWORDS="" +else + SRC_URI="https://pypi.python.org/packages/source/c/cutadapt/"${PN}"-"${PV}".tar.gz" + KEYWORDS="~amd64 ~x86" +fi + +LICENSE="MIT" +SLOT="0" +IUSE="" diff --git a/sci-biology/cutadapt/cutadapt-9999.ebuild b/sci-biology/cutadapt/cutadapt-9999.ebuild new file mode 100644 index 000000000..985fa125a --- /dev/null +++ b/sci-biology/cutadapt/cutadapt-9999.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +PYTHON_COMPAT=( python{2_6,2_7} ) + +inherit distutils-r1 + +[ "$PV" == "9999" ] && inherit git-2 + +DESCRIPTION="Remove adapter sequences from high-throughput sequencing data" +HOMEPAGE="https://code.google.com/p/cutadapt/" +if [ "$PV" == "9999" ]; then + EGIT_REPO_URI="https://github.com/marcelm/cutadapt" + KEYWORDS="" +else + SRC_URI="https://pypi.python.org/packages/source/c/cutadapt/"${PN}"-"${PV}".tar.gz" + KEYWORDS="~amd64 ~x86" +fi + +LICENSE="MIT" +SLOT="0" +IUSE="" |