sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html files into sys path

Package-Manager: portage-2.2.0_alpha180

4 files changed, 54 insertions, 35 deletions

diff --git a/sci-biology/sequin/ChangeLog b/sci-biology/sequin/ChangeLog
index ca9c2b059..639b7c7a9 100644
--- a/sci-biology/sequin/ChangeLog
+++ b/sci-biology/sequin/ChangeLog
@@ -1,7 +1,14 @@
 # ChangeLog for sci-biology/sequin
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*sequin-20121202 (16 Jun 2013)
+
+  16 Jun 2013; Justin Lecher <jlec@gentoo.org> -sequin-20090722.ebuild,
+  +sequin-20121202.ebuild:
+  Version BUmp; restrcit license; add QA_PREBUILT for binaries; install html
+  files into sys path
+
   25 Jun 2011; Justin Lecher <jlec@gentoo.org> metadata.xml:
   Fixed herd entry in metadata.xml
 
diff --git a/sci-biology/sequin/Manifest b/sci-biology/sequin/Manifest
index 442d7db82..956270595 100644
--- a/sci-biology/sequin/Manifest
+++ b/sci-biology/sequin/Manifest
@@ -1,2 +1,2 @@
-DIST sequin-20090722-x86.tar.gz 5999782 SHA256 f12fe7fa084a1d19a75e67cfcb4027cefb91c819b7c6219499072a87f00bdc51
-DIST sequin-20090722-x86_64.tar.gz 6911415 SHA256 338de057edf9c14e911f69c372c9480675c2b5a4b24efed605dcbdf7e8e4d486
+DIST sequin-20121202-x86.tar.gz 6760477 SHA256 a07bb9ad491b1ef0c7f03381bd73cab4bb6305a0897c117b071ad5a633a4a95e SHA512 a93d79b5a7ed7a42cc02107a0ca87051e3f95554afb103ad9fb17d1c98d4f0f5b3f01b512f63b8902cc9865a38eb10cf65cbae46a2fcf0ed4a9c1b9b697f47e9 WHIRLPOOL 288d75b4426edb9d657fe727a484a8f6009c71eff6f3202b412bbc635f52613f89955120ad0170c18f5e7d4bbf6e7f81a06b2f4b9b7f5166dc97617ee8a1c682
+DIST sequin-20121202-x86_64.tar.gz 8277570 SHA256 fe7d430a32320f22917fa515c3ba13b6fb3c9af42916759a353b9b62c0437b81 SHA512 33664d49cb0b33194d64781086ee27fad65602b6c058c4cc079ce840b6a4774c675b21c82bfcf2648b6b1f95fb0bcacc4f2eddb25d06fb8a363d4993cbb20b32 WHIRLPOOL 3f5c107701755eab1021014f9e9b333a74af42f49a1c6595d15cc38100ba1d5fe4c91fe1eef31083f937aae9bac66d94f21cd253430d1bb68e341ceb7308797b
diff --git a/sci-biology/sequin/sequin-20090722.ebuild b/sci-biology/sequin/sequin-20090722.ebuild
deleted file mode 100644
index b1d419648..000000000
--- a/sci-biology/sequin/sequin-20090722.ebuild
+++ /dev/null
@@ -1,32 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $
-
-EAPI=2
-
-inherit eutils
-
-DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases"
-HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/"
-SRC_URI="amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
-	x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )"
-
-LICENSE="as-is"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND="x11-libs/libXmu
-	x11-libs/libXp"
-
-S="${WORKDIR}"
-
-src_install() {
-	insinto /opt/${PN}
-	doins -r * || die
-	exeinto /opt/${PN}
-	doexe sequin || die
-	dosym /opt/${PN}/sequin /usr/bin/sequin || die
-	make_desktop_entry sequin Sequin || die
-}
diff --git a/sci-biology/sequin/sequin-20121202.ebuild b/sci-biology/sequin/sequin-20121202.ebuild
new file mode 100644
index 000000000..5e586dcd8
--- /dev/null
+++ b/sci-biology/sequin/sequin-20121202.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.1 2009/10/18 21:14:11 weaver Exp $
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="A tool to facilitate submission of data to the GenBank, EMBL, and DDBJ sequence databases"
+HOMEPAGE="http://www.ncbi.nlm.nih.gov/Sequin/"
+SRC_URI="
+	amd64? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
+	x86? ( ftp://ftp.ncbi.nih.gov/sequin/sequin.linux.tar.gz -> ${P}-x86.tar.gz )"
+#	amd64? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86_64.tar.gz -> ${P}-x86_64.tar.gz )
+#	x86? ( ftp://ftp.ncbi.nih.gov/sequin/old/${PV}/sequin.linux-x86.tar.gz -> ${P}-x86.tar.gz )"
+
+LICENSE="all-rights-reserved"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="
+	x11-libs/libXmu
+	x11-libs/libXp"
+
+S="${WORKDIR}"
+
+QA_PREBUILT="/opt/.*"
+
+src_install() {
+	dohtml -r *htm images
+	rm -rf *htm images || die
+
+	insinto /opt/${PN}
+	doins -r *
+
+	exeinto /opt/${PN}
+	doexe sequin
+
+	dosym /opt/${PN}/sequin /opt/bin/sequin
+
+	make_desktop_entry sequin Sequin
+}