diff options
| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-01-06 19:09:12 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-01-06 19:09:12 +0100 |
| commit | e8a05912f28739d65c2f1df6c31efaf95a138e59 (patch) | |
| tree | c39a26570f2a2e5c53c69ef85b02c23a275105d6 | |
| parent | sci-biology/DisEMBL: new package (diff) | |
| download | sci-e8a05912f28739d65c2f1df6c31efaf95a138e59.tar.gz sci-e8a05912f28739d65c2f1df6c31efaf95a138e59.tar.bz2 sci-e8a05912f28739d65c2f1df6c31efaf95a138e59.zip | |
sci-biology/cast-bin: new package
Package-Manager: portage-2.2.26
| -rw-r--r-- | sci-biology/cast-bin/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/cast-bin/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/cast-bin/cast-bin-20080813.ebuild | 32 | ||||
| -rw-r--r-- | sci-biology/cast-bin/metadata.xml | 9 |
4 files changed, 51 insertions, 0 deletions
diff --git a/sci-biology/cast-bin/ChangeLog b/sci-biology/cast-bin/ChangeLog new file mode 100644 index 000000000..aff5d4a34 --- /dev/null +++ b/sci-biology/cast-bin/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/cast-bin +# Copyright 1999-2016 Gentoo Foundation; Distributed under the GPL v2 +# $Id$ + +*cast-bin-20080813 (06 Jan 2016) + + 06 Jan 2016; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> + +cast-bin-20080813.ebuild, +metadata.xml: + sci-biology/cast-bin: new package diff --git a/sci-biology/cast-bin/Manifest b/sci-biology/cast-bin/Manifest new file mode 100644 index 000000000..249814a7c --- /dev/null +++ b/sci-biology/cast-bin/Manifest @@ -0,0 +1 @@ +DIST cast-linux.tar.gz 369636 SHA256 566ea6bd09f4621343189372df63f62eaa6cd6baefd785eb8421f99a099c5708 SHA512 85f3b4499afa7ff34f9401253c8f3c5a73c45868ed9a980af8246a00a3f05f25ddf5358c910a4aadd7057ea1614a597a2d5af5fafd119a7b2de47b9d434f3028 WHIRLPOOL 90279c555dcecd5fbee862f6a6010ffc73be0fe034495b978e3aa5f346a671d986a9d88fc1ea2ccd34978e193a3cb59dd93827847d7fd5bdb776029340ad2324 diff --git a/sci-biology/cast-bin/cast-bin-20080813.ebuild b/sci-biology/cast-bin/cast-bin-20080813.ebuild new file mode 100644 index 000000000..6f3add299 --- /dev/null +++ b/sci-biology/cast-bin/cast-bin-20080813.ebuild @@ -0,0 +1,32 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Predict low-complexity regions in putative proteins" +HOMEPAGE="http://bioinformatics.cenargen.embrapa.br/portrait/download" +SRC_URI="http://bioinformatics.cenargen.embrapa.br/portrait/download/cast-linux.tar.gz" + +# in 2000 in http://bioinformatics.oxfordjournals.org/content/16/10/915 +# authors stated: +# Availability: CAST (version 1.0) executable binaries are available to academic users free +# of charge under license. Web site entry point, server and additional material: +# http://www.ebi.ac.uk/research/cgg/services/cast/ +# +# but the license file included in cast-linux.tar.gz from 2002 contains GPL-2 license + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/cast-linux + +src_install(){ + dobin cast + dodoc README +} diff --git a/sci-biology/cast-bin/metadata.xml b/sci-biology/cast-bin/metadata.xml new file mode 100644 index 000000000..2bc893037 --- /dev/null +++ b/sci-biology/cast-bin/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> |