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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-04-18 00:22:17 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-04-18 00:22:17 +0200 |
| commit | 812a886bdcc45c891f93fb5caf73e5cee20c9aab (patch) | |
| tree | b2633248a472356498d77a49cad0971fc704674b /sci-biology/amos/amos-3.1.0-r2.ebuild | |
| parent | sci-biology/transdecoder: fixed installation of perl-related files (diff) | |
| download | sci-812a886bdcc45c891f93fb5caf73e5cee20c9aab.tar.gz sci-812a886bdcc45c891f93fb5caf73e5cee20c9aab.tar.bz2 sci-812a886bdcc45c891f93fb5caf73e5cee20c9aab.zip | |
sci-biology/amos: fixed installation of perl-related files
Package-Manager: portage-2.2.18
Diffstat (limited to 'sci-biology/amos/amos-3.1.0-r2.ebuild')
| -rw-r--r-- | sci-biology/amos/amos-3.1.0-r2.ebuild | 15 |
1 files changed, 8 insertions, 7 deletions
diff --git a/sci-biology/amos/amos-3.1.0-r2.ebuild b/sci-biology/amos/amos-3.1.0-r2.ebuild index ab8a404a9..2b9473db5 100644 --- a/sci-biology/amos/amos-3.1.0-r2.ebuild +++ b/sci-biology/amos/amos-3.1.0-r2.ebuild @@ -5,9 +5,11 @@ EAPI=5 PYTHON_COMPAT=( python2_7 ) - inherit eutils python-r1 +PERL_EXPORT_PHASE_FUNCTIONS=no +inherit perl-module eutils toolchain-funcs + DESCRIPTION="A Modular, Open-Source whole genome assembler" HOMEPAGE="http://amos.sourceforge.net/" SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" @@ -55,12 +57,11 @@ src_install() { python_replicate_script "${ED}"/usr/bin/goBambus2 # bambus needs TIGR::FASTAreader.pm and others # configure --libdir sadly copies both *.a files and *.pm into /usr/lib64/AMOS/ and /usr/lib64/TIGR/, work around it - mkdir -p "${D}"/usr/share/"${PN}"/perl/AMOS || die - mv "${D}"/usr/lib64/AMOS/*.pm "${D}"/usr/share/"${PN}"/perl/AMOS || die - mkdir -p "${D}"/usr/share/"${PN}"/perl/TIGR || die - mv "${D}"/usr/lib64/TIGR/*.pm "${D}"/usr/share/"${PN}"/perl/TIGR || die - echo "PERL5LIB=/usr/share/${PN}/perl" > "${S}/99${PN}" - doenvd "${S}/99${PN}" || die + perl_set_version + insinto ${VENDOR_LIB} + dobin "${D}"/usr/lib64/AMOS/*.pm + insinto ${VENDOR_LIB}/TIGR + dobin "${D}"/usr/lib64/TIGR/*.pm # move also /usr/lib64/AMOS/AMOS.py to /usr/bin mv "${D}"/usr/lib64/AMOS/*.py "${D}"/usr/bin || die } |