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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2016-04-10 14:36:05 +0200
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2016-04-10 14:36:05 +0200
commitd86874f2150d71241ce03d16f69736ccb5d72da3 (patch)
treef171021af1c002908a261208922ca0330e8547c9 /sci-biology/assembly-stats
parentsci-biology/bamtools: try to document roughly what jsoncpp version is likely ... (diff)
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sci-biology/assembly-stats: new package
Package-Manager: portage-2.2.28
Diffstat (limited to 'sci-biology/assembly-stats')
-rw-r--r--sci-biology/assembly-stats/assembly-stats-9999.ebuild22
-rw-r--r--sci-biology/assembly-stats/metadata.xml12
2 files changed, 34 insertions, 0 deletions
diff --git a/sci-biology/assembly-stats/assembly-stats-9999.ebuild b/sci-biology/assembly-stats/assembly-stats-9999.ebuild
new file mode 100644
index 000000000..895aa9a1f
--- /dev/null
+++ b/sci-biology/assembly-stats/assembly-stats-9999.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+inherit git-r3 cmake-utils
+
+DESCRIPTION="Assembly statistics (min, max, sum, N50, N90, count gaps and Ns)"
+HOMEPAGE="https://github.com/martinghunt/assembly-stats"
+EGIT_REPO_URI="https://github.com/martinghunt/assembly-stats.git"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND=">=dev-cpp/gtest-1.7.0"
+RDEPEND="${DEPEND}"
+
+# installs into /usr/local/bin
+# should not even try to compile bundled gtest
diff --git a/sci-biology/assembly-stats/metadata.xml b/sci-biology/assembly-stats/metadata.xml
new file mode 100644
index 000000000..f68a1b6fa
--- /dev/null
+++ b/sci-biology/assembly-stats/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>