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| author |   Andrey Kislyuk <kislyuk@devel.(none)> | 2009-03-15 19:35:36 -0400 |
|---|---|---|
| committer | Andrey Kislyuk <kislyuk@devel.(none)> | 2009-03-15 19:35:36 -0400 |
| commit | 6b2065b39b314c143ddea24fdddd1f6abf8c0e7e (patch) | |
| tree | 62f69838f1cfbd3b207ebe6c8fb19bcf3e9b595e /sci-biology/bowtie | |
| parent | sci-chemistry/openbabel-python: Fix S (diff) | |
| download | sci-6b2065b39b314c143ddea24fdddd1f6abf8c0e7e.tar.gz sci-6b2065b39b314c143ddea24fdddd1f6abf8c0e7e.tar.bz2 sci-6b2065b39b314c143ddea24fdddd1f6abf8c0e7e.zip | |
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Diffstat (limited to 'sci-biology/bowtie')
| -rw-r--r-- | sci-biology/bowtie/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/bowtie/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/bowtie/bowtie-0.9.9.ebuild | 29 | ||||
| -rw-r--r-- | sci-biology/bowtie/metadata.xml | 9 |
4 files changed, 0 insertions, 49 deletions
diff --git a/sci-biology/bowtie/ChangeLog b/sci-biology/bowtie/ChangeLog deleted file mode 100644 index c5f7214d2..000000000 --- a/sci-biology/bowtie/ChangeLog +++ /dev/null @@ -1,7 +0,0 @@ -# ChangeLog for sci-biology/bowtie -# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 27 Feb 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog: - New package sci-biology/bowtie, ebuild written by me - diff --git a/sci-biology/bowtie/Manifest b/sci-biology/bowtie/Manifest deleted file mode 100644 index ed04d590a..000000000 --- a/sci-biology/bowtie/Manifest +++ /dev/null @@ -1,4 +0,0 @@ -DIST bowtie-0.9.9-src.zip 10359925 RMD160 4d8ac96196706156693173e423a47e202b5462f3 SHA1 a4eaaa5efaa63c536baa8858915b610ad5cdfc3e SHA256 762a7420a0f53e1119875bc632db3409180fefed81a2b15240835dd5aaf1e7a7 -EBUILD bowtie-0.9.9.ebuild 829 RMD160 cd0dc280f5f6e8c3df9a2afb50b5c19bf67c2aef SHA1 703ee3d6844a8962ccf76ef9521bd33fdd2b60d9 SHA256 e0b190637528f6b2627a94c5ad101b2d809b2d50aa9613798e8845a1f1ed2c29 -MISC ChangeLog 236 RMD160 ddc673af819c1adfcd77885cf7dbf9ba364e59c4 SHA1 a8af862fe3be08446a71fd4f4b8f03805756a9c1 SHA256 049970cabe98950e7252f9ad8137a1b35364fd3b66f8af4230d68c4b8749f021 -MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/bowtie/bowtie-0.9.9.ebuild b/sci-biology/bowtie/bowtie-0.9.9.ebuild deleted file mode 100644 index 7c4f4ab97..000000000 --- a/sci-biology/bowtie/bowtie-0.9.9.ebuild +++ /dev/null @@ -1,29 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/maq/maq-0.7.1.ebuild,v 1.3 2009/02/26 17:36:19 weaver Exp $ - -DESCRIPTION="An ultrafast memory-efficient short read aligner" -HOMEPAGE="http://bowtie-bio.sourceforge.net/" -SRC_URI="mirror://sourceforge/bowtie-bio/${P}-src.zip" - -LICENSE="Artistic" -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~x86" - -DEPEND="app-arch/unzip" -RDEPEND="" - -# NB: Bundles code from Maq (http://maq.sf.net) and the SeqAn library (http://www.seqan.de) -# FIXME: Requires patching for gcc 4.3 - -src_unpack() { - unpack ${A} - sed -i 's/$(CXX) $(RELEASE_FLAGS)/$(CXX) $(CXXFLAGS) $(RELEASE_FLAGS)/' "${S}/Makefile" -} - -src_install() { - dobin bowtie bowtie-* || die - newman MANUAL bowtie.1 - dodoc AUTHORS NEWS TUTORIAL -} diff --git a/sci-biology/bowtie/metadata.xml b/sci-biology/bowtie/metadata.xml deleted file mode 100644 index 3302123e5..000000000 --- a/sci-biology/bowtie/metadata.xml +++ /dev/null @@ -1,9 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer> - <email>weaver@gentoo.org</email> - <name>Andrey Kislyuk</name> - </maintainer> - <herd>sci-biology</herd> -</pkgmetadata> |