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authorAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-01-24 15:05:05 +0100
committerAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-01-24 15:05:05 +0100
commit2a10d78f128dc80ac3713ffed5adbaa61ca3a6fe (patch)
treef01409f7416c77a56cc3e744941ecd8bf7d6d3e4 /sci-biology/breakdancer
parentsci-biology/bam-readcount: cmake-utils --> cmake, EAPI bump (diff)
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sci-biology/breakdancer: remove pack, repo archived, last update 2015, does not sync
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Diffstat (limited to 'sci-biology/breakdancer')
-rw-r--r--sci-biology/breakdancer/breakdancer-9999.ebuild22
-rw-r--r--sci-biology/breakdancer/metadata.xml12
2 files changed, 0 insertions, 34 deletions
diff --git a/sci-biology/breakdancer/breakdancer-9999.ebuild b/sci-biology/breakdancer/breakdancer-9999.ebuild
deleted file mode 100644
index 9944acce4..000000000
--- a/sci-biology/breakdancer/breakdancer-9999.ebuild
+++ /dev/null
@@ -1,22 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit cmake-utils git-r3 perl-functions
-
-DESCRIPTION="Genome-wide detection of structural variants from paired-end sequencing reads"
-HOMEPAGE="http://gmt.genome.wustl.edu/packages/breakdancer"
-EGIT_REPO_URI="https://github.com/genome/breakdancer.git"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS=""
-
-# http://search.cpan.org/~callahan/Math-CDF-0.1/CDF.pm
-DEPEND="
- dev-lang/perl
- dev-perl/Statistics-Descriptive
- sci-biology/samtools:0"
-RDEPEND="${DEPEND}"
diff --git a/sci-biology/breakdancer/metadata.xml b/sci-biology/breakdancer/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/breakdancer/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
-</pkgmetadata>