New package, ebuild written by me

1 files changed, 47 insertions, 0 deletions

diff --git a/sci-biology/erpin/erpin-5.5b.ebuild b/sci-biology/erpin/erpin-5.5b.ebuild
new file mode 100644
index 000000000..8aafe2078
--- /dev/null
+++ b/sci-biology/erpin/erpin-5.5b.ebuild
@@ -0,0 +1,47 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bowtie/bowtie-0.10.1.ebuild,v 1.3 2009/09/22 11:43:28 maekke Exp $
+
+EAPI="2"
+
+inherit toolchain-funcs
+
+ERPIN_BATCH_V=1.4
+
+DESCRIPTION="Easy RNA Profile IdentificatioN, an RNA motif search program"
+HOMEPAGE="http://tagc.univ-mrs.fr/erpin/"
+SRC_URI="http://rna.igmors.u-psud.fr/download/Erpin/erpin${PV}.serv.tar.gz
+	http://rna.igmors.u-psud.fr/download/Erpin/ErpinBatch.${ERPIN_BATCH_V}.tar.gz"
+
+LICENSE="as-is"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="!sys-cluster/maui" # file collision
+RDEPEND=""
+
+S="${WORKDIR}"
+
+src_prepare() {
+	rm -f erpin${PV}.serv/{bin,lib}/* || die
+	rm -f ErpinBatch.${ERPIN_BATCH_V}/erpin* || die
+	find -name '*.mk' | xargs sed -i \
+		-e 's/strip $@/echo skipping strip $@/' \
+		-e '/CFLAGS =/ d' \
+		-e "s/CC = .*/CC = $(tc-getCC)/" || die
+	sed -i 's/cc -O2/$(tc-getCC) ${CFLAGS}/' erpin${PV}.serv/sum/sum.mk || die
+}
+
+src_compile() {
+	emake -C erpin${PV}.serv -f erpin.mk || die
+}
+
+src_install() {
+	dobin erpin${PV}.serv/bin/* || die
+	insinto /usr/share/${PN}
+	doins -r erpin${PV}.serv/scripts ErpinBatch.${ERPIN_BATCH_V} || die
+	exeinto /usr/share/${PN}
+	newexe "${FILESDIR}/erpincommand-${PV}.pl" erpincommand.pl || die
+	dodoc erpin${PV}.serv/doc/doc*.pdf || die
+}