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| author |   Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2012-01-17 19:11:07 +0100 |
|---|---|---|
| committer | Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2012-01-17 19:11:07 +0100 |
| commit | bfc8451b06a8727456543751d139d29706473c03 (patch) | |
| tree | 43081fe325d6e680bafecb21659b58fc10ba7d20 /sci-biology/gbrowse/files | |
| parent | [sci-visualization/yt] initial import, ebuild written by me (diff) | |
| download | sci-bfc8451b06a8727456543751d139d29706473c03.tar.gz sci-bfc8451b06a8727456543751d139d29706473c03.tar.bz2 sci-bfc8451b06a8727456543751d139d29706473c03.zip | |
version bump and some fixes so that it works with webappconfig again?
(Portage version: 2.1.10.44/git/Linux i686, unsigned Manifest commit)
Diffstat (limited to 'sci-biology/gbrowse/files')
| -rw-r--r-- | sci-biology/gbrowse/files/GBrowseInstall.pm-2.45.patch | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/sci-biology/gbrowse/files/GBrowseInstall.pm-2.45.patch b/sci-biology/gbrowse/files/GBrowseInstall.pm-2.45.patch new file mode 100644 index 000000000..e91fe1634 --- /dev/null +++ b/sci-biology/gbrowse/files/GBrowseInstall.pm-2.45.patch @@ -0,0 +1,32 @@ +--- install_util/GBrowseInstall.pm.ori 2010-11-27 12:01:58.000000000 +0100 ++++ install_util/GBrowseInstall.pm 2010-11-27 12:02:15.000000000 +0100 +@@ -436,8 +436,8 @@ + $self->ownership_warning($databases,$user); + } + +- chmod 0755,File::Spec->catfile($self->install_path->{'etc'},'init.d','gbrowse-slave'); +- $self->fix_selinux; ++ # chmod 0755,File::Spec->catfile($self->install_path->{'etc'},'init.d','gbrowse-slave'); ++ # $self->fix_selinux; + + my $base = basename($self->install_path->{htdocs}); + +--- install_util/GBrowseInstall.pm.ori 2011-02-14 13:50:41.000000000 +0100 ++++ install_util/GBrowseInstall.pm 2011-02-14 13:51:46.000000000 +0100 +@@ -470,11 +470,11 @@ + my @inc = map{"-I$_"} split ':',$self->added_to_INC; + system $perl,@inc,$metadb_script; + +- if (Module::Build->y_n( +- "It is recommended that you restart Apache. Shall I try this for you?",'y' +- )) { +- system "sudo /etc/init.d/apache2 restart"; +- } ++# if (Module::Build->y_n( ++# "It is recommended that you restart Apache. Shall I try this for you?",'y' ++# )) { ++# system "sudo /etc/init.d/apache2 restart"; ++# } + + print STDERR "\n***INSTALLATION COMPLETE***\n"; + print STDERR "Load http://localhost/$base for demo and documentation.\n"; |