diff options
| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-05-02 00:40:41 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-05-02 00:40:41 +0200 |
| commit | cca8132f7c8070e2d6c06e0efbe01a1860a92fba (patch) | |
| tree | 75bba3d32c5b05a93fbb99294faa464672c1e2c8 /sci-biology/hexamer | |
| parent | sci-libs/lighter: new package; contains IUSE=threads but ... does the Makefil... (diff) | |
| download | sci-cca8132f7c8070e2d6c06e0efbe01a1860a92fba.tar.gz sci-cca8132f7c8070e2d6c06e0efbe01a1860a92fba.tar.bz2 sci-cca8132f7c8070e2d6c06e0efbe01a1860a92fba.zip | |
sci-biology/hexamer: new package
Package-Manager: portage-2.2.18
Diffstat (limited to 'sci-biology/hexamer')
| -rw-r--r-- | sci-biology/hexamer/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/hexamer/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/hexamer/hexamer-19990330.ebuild | 30 | ||||
| -rw-r--r-- | sci-biology/hexamer/metadata.xml | 9 |
4 files changed, 49 insertions, 0 deletions
diff --git a/sci-biology/hexamer/ChangeLog b/sci-biology/hexamer/ChangeLog new file mode 100644 index 000000000..7a2252f9c --- /dev/null +++ b/sci-biology/hexamer/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/hexamer +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*hexamer-19990330 (01 May 2015) + + 01 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> + +hexamer-19990330.ebuild, +metadata.xml: + sci-biology/hexamer: new package diff --git a/sci-biology/hexamer/Manifest b/sci-biology/hexamer/Manifest new file mode 100644 index 000000000..778aad15b --- /dev/null +++ b/sci-biology/hexamer/Manifest @@ -0,0 +1 @@ +DIST hexamer-19990330.tar.gz 142855 SHA256 bf4cbea551b7338c822d52e0887780085af29382ffac78618916e3e17357c337 SHA512 d5c53a43d00a16e346798129d671a12da3e1d4e0ca64d9dd6aed96e909707d5f2812a86a4df9a7621beea65573f24c8b74c94d81c17c91ba9afd3376d85b398b WHIRLPOOL 7de34b7c52c722feff692e248fb85eb61a08d2747b61c70c2e65f35e09765c95106a87c7f5aee8a8128ff28e94376b26b0b81ed01e61072beda2f6482570633b diff --git a/sci-biology/hexamer/hexamer-19990330.ebuild b/sci-biology/hexamer/hexamer-19990330.ebuild new file mode 100644 index 000000000..fda4818ce --- /dev/null +++ b/sci-biology/hexamer/hexamer-19990330.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit toolchain-funcs + +DESCRIPTION="Predict CDS using 6mers without deriving information from base composition" +HOMEPAGE="http://www.sanger.ac.uk/resources/software" +SRC_URI="ftp://ftp.sanger.ac.uk/pub/users/rd/hexamer.tar.gz -> hexamer-19990330.tar.gz" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/hexamer + +src_prepare(){ + sed -e "s#cc -g#$(tc-getCC) ${CFLAGS}#" -i Makefile || die +} + +src_install(){ + dobin hexamer hextable + dodoc README +} diff --git a/sci-biology/hexamer/metadata.xml b/sci-biology/hexamer/metadata.xml new file mode 100644 index 000000000..2bc893037 --- /dev/null +++ b/sci-biology/hexamer/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> |