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| author |   Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-03-06 13:33:26 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-03-06 13:33:26 +0100 |
| commit | 6929b1a09d3e66fd239b9ea5983306aeaf9ec249 (patch) | |
| tree | 4ce0ad80f323f866304036bac5d78a1f0067fe23 /sci-biology/mip-scaffolder | |
| parent | sci-biology/minced: EAPI bump, add keywords (diff) | |
| download | sci-6929b1a09d3e66fd239b9ea5983306aeaf9ec249.tar.gz sci-6929b1a09d3e66fd239b9ea5983306aeaf9ec249.tar.bz2 sci-6929b1a09d3e66fd239b9ea5983306aeaf9ec249.zip | |
sci-biology/mip-scaffolder: EAPI bump
Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Diffstat (limited to 'sci-biology/mip-scaffolder')
| -rw-r--r-- | sci-biology/mip-scaffolder/mip-scaffolder-0.6.ebuild | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/sci-biology/mip-scaffolder/mip-scaffolder-0.6.ebuild b/sci-biology/mip-scaffolder/mip-scaffolder-0.6.ebuild index cb1da348f..aa2c6b3e7 100644 --- a/sci-biology/mip-scaffolder/mip-scaffolder-0.6.ebuild +++ b/sci-biology/mip-scaffolder/mip-scaffolder-0.6.ebuild @@ -1,18 +1,17 @@ -# Copyright 1999-2015 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=7 inherit toolchain-funcs DESCRIPTION="Scaffold contigs using ABI Solid or Illumina mate pair info" HOMEPAGE="http://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder" -SRC_URI="http://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/"${P}".tar.gz" +SRC_URI="http://www.cs.helsinki.fi/u/lmsalmel/mip-scaffolder/${P}.tar.gz" LICENSE="BSD-2" SLOT="0" KEYWORDS="~amd64" -IUSE="" DEPEND="sci-libs/lemon sci-mathematics/lpsolve @@ -20,6 +19,7 @@ DEPEND="sci-libs/lemon RDEPEND="${DEPEND}" src_prepare(){ + default sed -e 's:/home/user/lp-solve/:/usr/include/lpsolve/:; s:/home/user/lemon/:/usr/include/lemon:; s:/home/user/mip-scaffolder-0.6/:/usr/bin:' -i Makefile find . -name Makefile | while read f; do sed -e "s:CC=g++:CC=$(tc-getCXX):; s:CFLAGS=-Wall -g -O9:CFLAGS=${CXXFLAGS}:" -i $f; done sed -e 's:$(LPSOLVEROOT)/liblpsolve55.a:-llpsolve55:' -i split-scaffold/Makefile |