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authorAndrey Kislyuk <kislyuk@onyx.(none)>2009-07-07 09:03:41 -0400
committerAndrey Kislyuk <kislyuk@onyx.(none)>2009-07-07 09:03:41 -0400
commit075b4fb9cd5cd9ae5678ae12f42fa1bc1f207cdd (patch)
tree37f70bf49521ae9f000bc271208e57b41fe6574b /sci-biology/mothur
parentIn gentoo-x86 (diff)
downloadsci-075b4fb9cd5cd9ae5678ae12f42fa1bc1f207cdd.tar.gz
sci-075b4fb9cd5cd9ae5678ae12f42fa1bc1f207cdd.tar.bz2
sci-075b4fb9cd5cd9ae5678ae12f42fa1bc1f207cdd.zip
In gentoo-x86
Diffstat (limited to 'sci-biology/mothur')
-rw-r--r--sci-biology/mothur/ChangeLog7
-rw-r--r--sci-biology/mothur/Manifest4
-rw-r--r--sci-biology/mothur/metadata.xml9
-rw-r--r--sci-biology/mothur/mothur-1.0.ebuild29
4 files changed, 0 insertions, 49 deletions
diff --git a/sci-biology/mothur/ChangeLog b/sci-biology/mothur/ChangeLog
deleted file mode 100644
index 9b99ab458..000000000
--- a/sci-biology/mothur/ChangeLog
+++ /dev/null
@@ -1,7 +0,0 @@
-# ChangeLog for sci-biology/mothur
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
- 04 Mar 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
- New package, ebuild written by me
-
diff --git a/sci-biology/mothur/Manifest b/sci-biology/mothur/Manifest
deleted file mode 100644
index d17a045cb..000000000
--- a/sci-biology/mothur/Manifest
+++ /dev/null
@@ -1,4 +0,0 @@
-DIST mothur-1.0.zip 162179 RMD160 fdbfacedaf1e5c1da37f78b30f83939b0af35e5a SHA1 ce22c595e7a077b03d66047745d8498767f49ee3 SHA256 1d53d06d06b52f8cb56cafbdc1bdb4ee380ee8b286edf3ba2645b218a9dd8fb1
-EBUILD mothur-1.0.ebuild 728 RMD160 17076554708f94d307fed511f0ce548689bc7788 SHA1 8a4c12cf979b536e3b4df11f9dba635f316c7bce SHA256 e4f3d76fad9955dd479b7806fea861fa4174880909c5b01886311006710c073c
-MISC ChangeLog 217 RMD160 9c14f67d92961a70797085d5e51d87e134d298c0 SHA1 e388764d9b693f411ff916545a6380b7168e2a69 SHA256 4f50b53c8bce733857afede7c0b2dcfa6f48c656b56ecca937e28b08a0ec9142
-MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/mothur/metadata.xml b/sci-biology/mothur/metadata.xml
deleted file mode 100644
index 3302123e5..000000000
--- a/sci-biology/mothur/metadata.xml
+++ /dev/null
@@ -1,9 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer>
- <email>weaver@gentoo.org</email>
- <name>Andrey Kislyuk</name>
- </maintainer>
- <herd>sci-biology</herd>
-</pkgmetadata>
diff --git a/sci-biology/mothur/mothur-1.0.ebuild b/sci-biology/mothur/mothur-1.0.ebuild
deleted file mode 100644
index 28a7ac1c6..000000000
--- a/sci-biology/mothur/mothur-1.0.ebuild
+++ /dev/null
@@ -1,29 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/amos/amos-2.0.8.ebuild,v 1.1 2008/08/26 16:33:07 weaver Exp $
-
-inherit toolchain-funcs
-
-DESCRIPTION="A suite of algorithms for ecological bioinformatics"
-HOMEPAGE="http://schloss.micro.umass.edu/mothur/Main_Page"
-SRC_URI="mirror://gentoo/${P}.zip"
-
-LICENSE="GPL-1"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND="app-arch/unzip"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}"
-
-src_unpack() {
- unpack ${A}
- sed -i -e 's/CCP_OPTIONS =/CCP_OPTIONS = ${CXXFLAGS}/' \
- -e 's|CPP = /usr/bin/g++|CPP = '$(tc-getCXX)'|' "${S}/makefile" || die
-}
-
-src_install() {
- dobin mothur || die
-}