diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2011-06-25 15:44:37 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2011-06-25 15:44:37 +0200 |
| commit | d510ea19782b4e68bf53ac5beb1d38b64fb5c459 (patch) | |
| tree | d03603cefa97074568bd812607ea8c8231e54034 /sci-biology/mrbayes | |
| parent | RDEPEND is not explicitly assigned -> fixed (diff) | |
| download | sci-d510ea19782b4e68bf53ac5beb1d38b64fb5c459.tar.gz sci-d510ea19782b4e68bf53ac5beb1d38b64fb5c459.tar.bz2 sci-d510ea19782b4e68bf53ac5beb1d38b64fb5c459.zip | |
RDEPEND is not explicitly assigned -> fixed
(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology/mrbayes')
| -rw-r--r-- | sci-biology/mrbayes/ChangeLog | 6 | ||||
| -rw-r--r-- | sci-biology/mrbayes/Manifest | 14 | ||||
| -rw-r--r-- | sci-biology/mrbayes/metadata.xml | 4 | ||||
| -rw-r--r-- | sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild | 13 |
4 files changed, 22 insertions, 15 deletions
diff --git a/sci-biology/mrbayes/ChangeLog b/sci-biology/mrbayes/ChangeLog index f2ce30569..7c54e60cf 100644 --- a/sci-biology/mrbayes/ChangeLog +++ b/sci-biology/mrbayes/ChangeLog @@ -1,7 +1,11 @@ # ChangeLog for sci-biology/mrbayes -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/ChangeLog,v 1.19 2008/06/11 18:10:48 ken69267 Exp $ + 25 Jun 2011; Justin Lecher <jlec@gentoo.org> mrbayes-3.1.2-r1.ebuild, + metadata.xml: + RDEPEND is not explicitly assigned -> fixed + 27 Jun 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> mrbayes-3.1.2-r1.ebuild: QA fixes diff --git a/sci-biology/mrbayes/Manifest b/sci-biology/mrbayes/Manifest index 460d996bd..96dcbdf8a 100644 --- a/sci-biology/mrbayes/Manifest +++ b/sci-biology/mrbayes/Manifest @@ -1,15 +1,15 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 +Hash: SHA256 AUX mb_readline_312.patch 1108 RMD160 5901513567ef2198b4c9c1baeb1ecc295af3eee8 SHA1 c5526cf58fe15cb22c401de19de7056a66c37414 SHA256 6d7566cbe59eee9881b41a21ea561fd610816df768bb8fda42ef4435c84f5f22 DIST mrbayes-3.1.2.tar.gz 545968 RMD160 b90b9406f34806bcd18bc49dc998b7ed444e93c3 SHA1 db73f53361688e1451ec155ccbdd130c3f889817 SHA256 c60253de1980c9f0a0eb684fffe7ba428fda7c39a3edcb6acf384b5e1443f2f4 -EBUILD mrbayes-3.1.2-r1.ebuild 1290 RMD160 52c800c093906d48537c435023df1f66451fe922 SHA1 7eba0fc3d2cf3e948d806d02fb35138bb631d27c SHA256 f618505f87992eedece3d4fa76ada6091f1f3b0a83901eadb106bb2b2cb15dba -MISC ChangeLog 2968 RMD160 09b289d34cd8679cbee91b06804825d0af85d41b SHA1 0a04a57f0930a2813d3c423a38a7d65c994a4504 SHA256 a5a75909a551d9064baa39f8417fab021d253947715d9bac92d1a491cd3ea8fb -MISC metadata.xml 730 RMD160 46eda6e69c53a0e301343cfc645c343c5aa9fdd6 SHA1 06e33f8fa877635c7e771e74e3edeb8cba146fb3 SHA256 fe9b9273c53a7c502d6688d63557fe603f63a47c8ff17355b9db7cdc0b78f446 +EBUILD mrbayes-3.1.2-r1.ebuild 1316 RMD160 ded04cf025556ded7cd1c34f18c283dde70ae5d4 SHA1 a660680775448d9f313e7040eed5436eab172fba SHA256 fd3653ddccf4faa0dddfb502b8d0ea59cfcf7a2788dc1906b58607638de716c6 +MISC ChangeLog 3103 RMD160 46686758663971c63f4504b3f6765112da662bee SHA1 fd287ecf0d712fd76267cf73d9a96bd554acff40 SHA256 644b6d880b1e332e61ba896a2e86347b42f18ced23f83922f3cdd674df2f786b +MISC metadata.xml 732 RMD160 c9c73ca971a4c88f5054245bde9585b694924fe8 SHA1 7d2195b53ba6e6a30f6a3c84072d62a0822faf06 SHA256 b1d3e5fd22ec3c1cd73e0a1de97d994690145894dbe024cf66e91e56ee3925eb -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.17 (GNU/Linux) -iEYEARECAAYFAk4EiS4ACgkQgAnW8HDreRbreACggPNR692TY3Lt0zsLxHq3S45r -xN0An0fOJoxM+nnj8zK+n8csNJZo375z -=eJLU +iEYEAREIAAYFAk4F5kUACgkQgAnW8HDreRbrcQCgwaM3QhDgQSOnyM7DN3nNw1Bt +tkoAn0eVMkH/raPdh1MAcoQEK0QFsI3d +=OD3v -----END PGP SIGNATURE----- diff --git a/sci-biology/mrbayes/metadata.xml b/sci-biology/mrbayes/metadata.xml index d33282dbb..102b1ec80 100644 --- a/sci-biology/mrbayes/metadata.xml +++ b/sci-biology/mrbayes/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> -<longdescription> + <herd>sci-biology</herd> + <longdescription> MrBayes is a program for the Bayesian estimation of phylogeny. Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a diff --git a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild b/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild index d4ad59333..f29856adf 100644 --- a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild +++ b/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild @@ -1,25 +1,28 @@ -# Copyright 1999-2010 Gentoo Foundation +# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/mrbayes-3.1.2.ebuild,v 1.7 2008/06/11 18:10:48 ken69267 Exp $ inherit eutils mpi toolchain-funcs DESCRIPTION="Bayesian Inference of Phylogeny" -LICENSE="GPL-2" HOMEPAGE="http://mrbayes.csit.fsu.edu/" SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" SLOT="0" -IUSE="mpi readline" +LICENSE="GPL-2" KEYWORDS="~amd64 ~x86" +IUSE="mpi readline" -DEPEND="mpi? ( $(mpi_pkg_deplist) ) +DEPEND=" + mpi? ( $(mpi_pkg_deplist) ) readline? ( sys-libs/readline )" +RDEPEND="${DEPEND}" src_unpack() { unpack ${A} cd "${S}" - sed -e "s:OPTFLAGS ?= -O3:CFLAGS = ${CFLAGS}:" \ + sed \ + -e "s:OPTFLAGS ?= -O3:CFLAGS = ${CFLAGS}:" \ -e "s:CC = gcc:CC = $(tc-getCC):" \ -e "s:CC = mpicc:CC = $(mpi_pkg_cc):" \ -e "s:LDFLAGS =:LDFLAGS ?=:" \ |