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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-03-23 19:28:08 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-03-23 19:28:08 +0100 |
| commit | 0ece3b3803a4d4be8aeeb140f51b3b46dee6ee6f (patch) | |
| tree | 50eea65dc7d10a1fec4218c48027df4e23209177 /sci-biology/ncbi-tools++ | |
| parent | sci-biology/ncbi-tools++: more patches (diff) | |
| download | sci-0ece3b3803a4d4be8aeeb140f51b3b46dee6ee6f.tar.gz sci-0ece3b3803a4d4be8aeeb140f51b3b46dee6ee6f.tar.bz2 sci-0ece3b3803a4d4be8aeeb140f51b3b46dee6ee6f.zip | |
sci-biology/ncbi-tools++: yet another linking fix
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology/ncbi-tools++')
| -rw-r--r-- | sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-app-convert_seq-linking.patch | 11 | ||||
| -rw-r--r-- | sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild | 1 |
2 files changed, 12 insertions, 0 deletions
diff --git a/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-app-convert_seq-linking.patch b/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-app-convert_seq-linking.patch new file mode 100644 index 000000000..e495c9645 --- /dev/null +++ b/sci-biology/ncbi-tools++/files/ncbi-tools++-18.0.0-fix-app-convert_seq-linking.patch @@ -0,0 +1,11 @@ +--- ncbi_cxx--18_0_0/src/app/convert_seq/Makefile.convert_seq.app.ori 2017-03-23 19:24:31.534280319 +0100 ++++ ncbi_cxx--18_0_0/src/app/convert_seq/Makefile.convert_seq.app 2017-03-23 19:25:14.395360214 +0100 +@@ -2,7 +2,7 @@ + + APP = convert_seq + SRC = convert_seq +-LIB = $(ncbi_xloader_wgs) $(SRAREAD_LIBS) xobjwrite \ ++LIB = $(ncbi_xloader_wgs) $(SRAREAD_LIBS) xobjwrite variation_utils \ + $(OBJREAD_LIBS) $(XFORMAT_LIBS) xalnmgr xobjutil tables xregexp \ + $(PCRE_LIB) $(OBJMGR_LIBS) + diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild index 7a70e8f5e..ce5b4ddb8 100644 --- a/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild +++ b/sci-biology/ncbi-tools++/ncbi-tools++-18.0.0.ebuild @@ -118,6 +118,7 @@ src_prepare() { "${FILESDIR}"/${P}-fix-apps-blast-linking.patch "${FILESDIR}"/${P}-fix-sample-app-cgi-linking.patch "${FILESDIR}"/${P}-fix-app-compartp-linking.patch + "${FILESDIR}"/${P}-fix-app-convert_seq-linking.patch ) #ncbi-tools++-18.0.0-fix-undefined-lxncbi.patch epatch ${PATCHES[@]} |