diff options
| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-31 18:16:00 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-31 18:16:00 +0100 |
| commit | 2ad8d135f344e32e7f1627bb293b776b36db9b80 (patch) | |
| tree | 8119c8cd3623ee27fcc3cba1e9ba70a381b43ce4 /sci-biology/repeatmasker | |
| parent | sci-biology/repeatmasker: add missing call to default in src_prepare() (diff) | |
| download | sci-2ad8d135f344e32e7f1627bb293b776b36db9b80.tar.gz sci-2ad8d135f344e32e7f1627bb293b776b36db9b80.tar.bz2 sci-2ad8d135f344e32e7f1627bb293b776b36db9b80.zip | |
sci-biology/repeatmasker: respect EPREFIX
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology/repeatmasker')
| -rw-r--r-- | sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild | 16 |
1 files changed, 8 insertions, 8 deletions
diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild index e0ad29471..221c56270 100644 --- a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild +++ b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild @@ -49,20 +49,20 @@ src_configure() { echo " env \"${S}\" -/opt/bin +"${EPREFIX}"/opt/bin 1 -/usr/bin +"${EPREFIX}"/usr/bin Y 2 -/usr/bin +"${EPREFIX}"/usr/bin Y 4 -/usr/bin +"${EPREFIX}"/usr/bin Y 5" | "${S}/configure" || die "configure failed" - sed -i -e 's|use lib $FindBin::RealBin;|use lib "/usr/share/'${PN}'/lib";|' \ - -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/Libraries/\1"|' \ - -e '/$REPEATMASKER_DIR/ s|$FindBin::RealBin|/usr/share/'${PN}'|' \ + sed -i -e "s|use lib $FindBin::RealBin;|use lib ${EPREFIX}/usr/share/${PN}/lib;|" \ + -e "s|.*\(taxonomy.dat\)|${EPREFIX}/usr/share/${PN}/Libraries/\1|" \ + -e "/$REPEATMASKER_DIR/ s|$FindBin::RealBin|${EPREFIX}/usr/share/${PN}|" \ "${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm} || die } # configure failed to 'cp RepeatMaskerConfig.tmpl RepeatMaskerConfig.pm' @@ -97,7 +97,7 @@ pkg_postinst(){ einfo "from Dfam-1.0 database www.dfam.org" einfo "You can configure which search search engine is to be used and" einfo "PATHs to the search binaries are defined in" - einfo "/usr/share/${PN}/lib/RepeatMaskerConfig.pm" + einfo "${EPREFIX}/usr/share/${PN}/lib/RepeatMaskerConfig.pm" einfo "Supported search engines are:" optfeature "cross_match" sci-biology/phrap optfeature "rmblast" sci-biology/rmblast |