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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-12-06 20:37:00 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-12-06 20:37:00 +0100 |
| commit | 89c3d525fd3f87807f0233a6a561da7873a559f9 (patch) | |
| tree | 349684ea6698ffa5c51da7885290a5ed76d95f6d /sci-biology/repeatmasker | |
| parent | sci-libs/atlas: Fix underlinking (diff) | |
| download | sci-89c3d525fd3f87807f0233a6a561da7873a559f9.tar.gz sci-89c3d525fd3f87807f0233a6a561da7873a559f9.tar.bz2 sci-89c3d525fd3f87807f0233a6a561da7873a559f9.zip | |
sci-biology/repeatmasker: fix ebuild so that it installs files in a proper location
Package-Manager: portage-2.2.26
Diffstat (limited to 'sci-biology/repeatmasker')
| -rw-r--r-- | sci-biology/repeatmasker/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/repeatmasker/repeatmasker-4.0.6-r1.ebuild (renamed from sci-biology/repeatmasker/repeatmasker-4.0.6.ebuild) | 9 |
2 files changed, 13 insertions, 3 deletions
diff --git a/sci-biology/repeatmasker/ChangeLog b/sci-biology/repeatmasker/ChangeLog index 872aa83a0..86d8a7aef 100644 --- a/sci-biology/repeatmasker/ChangeLog +++ b/sci-biology/repeatmasker/ChangeLog @@ -2,6 +2,13 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Id$ +*repeatmasker-4.0.6-r1 (06 Dec 2015) + + 06 Dec 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> + +repeatmasker-4.0.6-r1.ebuild, -repeatmasker-4.0.6.ebuild: + sci-biology/repeatmasker: fix ebuild so that it installs files in a proper + location + 01 Dec 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +files/repeatmasker-4.0.6__configure.patch, -files/RepeatMasker-open-4-0-1__configure.patch, diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.6.ebuild b/sci-biology/repeatmasker/repeatmasker-4.0.6-r1.ebuild index 89b7c7f60..c7f93fb72 100644 --- a/sci-biology/repeatmasker/repeatmasker-4.0.6.ebuild +++ b/sci-biology/repeatmasker/repeatmasker-4.0.6-r1.ebuild @@ -58,7 +58,7 @@ Y Y 5" | "${S}/configure" || die "configure failed" sed -i -e 's|use lib $FindBin::RealBin;|use lib "/usr/share/'${PN}'/lib";|' \ - -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/\1"|' \ + -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/Libraries/\1"|' \ -e '/$REPEATMASKER_DIR/ s|$FindBin::RealBin|/usr/share/'${PN}'|' \ "${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm} || die } @@ -74,14 +74,17 @@ src_install() { dodir /usr/share/${PN}/lib insinto /usr/share/${PN}/lib - doins "${S}"/*.pm || die + doins "${S}"/*.pm + insinto /usr/share/${PN}/lib/Libraries + doins "${S}"/Libraries/*.pm + rm -rf "${S}"/Libraries/*.pm # zap the supposedly misplaced RepeatAnnotationData.pm file # if sci-biology/repeatmasker-libraries is installed prevent file collision # and do NOT install Libraries/RepeatMaskerLib.embl file which contains # a limited version of the file: 20110419-min rm -rf Libraries/RepeatMaskerLib.embl insinto /usr/share/${PN} - doins -r util Matrices Libraries taxonomy.dat *.help || die + doins -r util Matrices Libraries *.help keepdir /usr/share/${PN}/Libraries dodoc README INSTALL *.help |