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| author |   mschubert <mschu.dev@gmail.com> | 2016-01-23 21:59:18 +0000 |
|---|---|---|
| committer |   Justin Lecher <jlec@gentoo.org> | 2016-02-28 10:43:14 +0000 |
| commit | 78cab883d2457b52fb12f8a72ec7ce29c0d51950 (patch) | |
| tree | 066b658cdaa9b264a5102d73bf801787f00bde9c /sci-biology/sailfish/sailfish-9999.ebuild | |
| parent | sci-biology/salmon: bump EAPI=6 (diff) | |
| download | sci-78cab883d2457b52fb12f8a72ec7ce29c0d51950.tar.gz sci-78cab883d2457b52fb12f8a72ec7ce29c0d51950.tar.bz2 sci-78cab883d2457b52fb12f8a72ec7ce29c0d51950.zip | |
sci-biology/sailfish: add ebuild
Package-Manager: portage-2.2.20-prefix
Diffstat (limited to 'sci-biology/sailfish/sailfish-9999.ebuild')
| -rw-r--r-- | sci-biology/sailfish/sailfish-9999.ebuild | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/sci-biology/sailfish/sailfish-9999.ebuild b/sci-biology/sailfish/sailfish-9999.ebuild new file mode 100644 index 000000000..2d60e34cb --- /dev/null +++ b/sci-biology/sailfish/sailfish-9999.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit cmake-utils git-r3 + +DESCRIPTION="Rapid Mapping-based Isoform Quantification from RNA-Seq Reads" +HOMEPAGE="http://www.cs.cmu.edu/~ckingsf/software/sailfish/" +SRC_URI="" +EGIT_REPO_URI="https://github.com/kingsfordgroup/sailfish.git" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" + +PATCHES=( "${FILESDIR}"/${PN}-0.9.1-no-boost-static.patch ) + +DEPEND="dev-libs/boost:0 + dev-libs/jemalloc + dev-cpp/tbb" +RDEPEND="${DEPEND}" + +src_install() { + cmake-utils_src_install + rm -r "${ED}"/usr/tests || die +} |