diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2015-09-21 19:25:05 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2015-09-21 19:25:05 +0200 |
| commit | 3b78eff2b8046466746871467e132507bcf8d013 (patch) | |
| tree | 653643359a9e701d8849644f9e9f47a564046690 /sci-biology/samtools | |
| parent | sci-biology/inGAP-bin: Add subslot operators (diff) | |
| download | sci-3b78eff2b8046466746871467e132507bcf8d013.tar.gz sci-3b78eff2b8046466746871467e132507bcf8d013.tar.bz2 sci-3b78eff2b8046466746871467e132507bcf8d013.zip | |
sci-biology/samtools: Add subslot operators
Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology/samtools')
| -rw-r--r-- | sci-biology/samtools/samtools-1.0-r2.ebuild | 8 | ||||
| -rw-r--r-- | sci-biology/samtools/samtools-1.1-r1.ebuild | 8 | ||||
| -rw-r--r-- | sci-biology/samtools/samtools-1.2-r1.ebuild | 8 |
3 files changed, 12 insertions, 12 deletions
diff --git a/sci-biology/samtools/samtools-1.0-r2.ebuild b/sci-biology/samtools/samtools-1.0-r2.ebuild index d81f8157f..b10e681e1 100644 --- a/sci-biology/samtools/samtools-1.0-r2.ebuild +++ b/sci-biology/samtools/samtools-1.0-r2.ebuild @@ -20,7 +20,7 @@ IUSE="examples" REQUIRED_USE="${PYTHON_REQUIRED_USE}" CDEPEND=" - sys-libs/ncurses + sys-libs/ncurses:0= sci-libs/htslib" RDEPEND="${CDEPEND} @@ -34,15 +34,15 @@ src_prepare() { sed -i 's~/software/bin/python~/usr/bin/env python~' "${S}"/misc/varfilter.py || die - epatch "${FILESDIR}"/${P}-buildsystem.patch - epatch "${FILESDIR}"/${P}-rmdup.patch + epatch \ + "${FILESDIR}"/${P}-buildsystem.patch \ + "${FILESDIR}"/${P}-rmdup.patch tc-export CC AR sed \ -e '/htslib.mk/d' \ -i Makefile || die - } src_compile() { diff --git a/sci-biology/samtools/samtools-1.1-r1.ebuild b/sci-biology/samtools/samtools-1.1-r1.ebuild index 0d65870ce..99411568b 100644 --- a/sci-biology/samtools/samtools-1.1-r1.ebuild +++ b/sci-biology/samtools/samtools-1.1-r1.ebuild @@ -20,7 +20,7 @@ IUSE="examples" REQUIRED_USE="${PYTHON_REQUIRED_USE}" CDEPEND=" - sys-libs/ncurses + sys-libs/ncurses:0= ~sci-libs/htslib-${PV}" RDEPEND="${CDEPEND} @@ -34,15 +34,15 @@ src_prepare() { sed -i 's~/software/bin/python~/usr/bin/env python~' "${S}"/misc/varfilter.py || die - epatch "${FILESDIR}"/${P}-buildsystem.patch - epatch "${FILESDIR}"/${P}-rmdup.patch + epatch \ + "${FILESDIR}"/${P}-buildsystem.patch \ + "${FILESDIR}"/${P}-rmdup.patch tc-export CC AR sed \ -e '/htslib.mk/d' \ -i Makefile || die - } src_compile() { diff --git a/sci-biology/samtools/samtools-1.2-r1.ebuild b/sci-biology/samtools/samtools-1.2-r1.ebuild index 648032c5c..dcbd07b69 100644 --- a/sci-biology/samtools/samtools-1.2-r1.ebuild +++ b/sci-biology/samtools/samtools-1.2-r1.ebuild @@ -20,7 +20,7 @@ IUSE="examples" REQUIRED_USE="${PYTHON_REQUIRED_USE}" CDEPEND=" - sys-libs/ncurses + sys-libs/ncurses:0= >=sci-libs/htslib-${PV}" RDEPEND="${CDEPEND} @@ -34,15 +34,15 @@ src_prepare() { sed -i 's~/software/bin/python~/usr/bin/env python~' "${S}"/misc/varfilter.py || die - epatch "${FILESDIR}"/${P}-buildsystem.patch - epatch "${FILESDIR}"/${P}-rmdup.patch + epatch \ + "${FILESDIR}"/${P}-buildsystem.patch \ + "${FILESDIR}"/${P}-rmdup.patch tc-export CC AR sed \ -e '/htslib.mk/d' \ -i Makefile || die - } src_compile() { |