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| author |   weaver <weaver@32389bae-6d03-0410-99cf-db05cde120eb> | 2007-04-27 01:56:36 +0000 |
|---|---|---|
| committer | weaver <weaver@32389bae-6d03-0410-99cf-db05cde120eb> | 2007-04-27 01:56:36 +0000 |
| commit | af4daff3871b80d23a73e7e7af5856c871619cd0 (patch) | |
| tree | e70b965c75c4564e0978379b5e36b5fccb835975 /sci-biology/sibsim4 | |
| parent | new use flag for sci-biology import (diff) | |
| download | sci-af4daff3871b80d23a73e7e7af5856c871619cd0.tar.gz sci-af4daff3871b80d23a73e7e7af5856c871619cd0.tar.bz2 sci-af4daff3871b80d23a73e7e7af5856c871619cd0.zip | |
Mass import from sunrise
git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@577 32389bae-6d03-0410-99cf-db05cde120eb
Diffstat (limited to 'sci-biology/sibsim4')
| -rw-r--r-- | sci-biology/sibsim4/ChangeLog | 11 | ||||
| -rw-r--r-- | sci-biology/sibsim4/Manifest | 12 | ||||
| -rw-r--r-- | sci-biology/sibsim4/files/digest-sibsim4-0.14 | 3 | ||||
| -rw-r--r-- | sci-biology/sibsim4/sibsim4-0.14.ebuild | 27 |
4 files changed, 53 insertions, 0 deletions
diff --git a/sci-biology/sibsim4/ChangeLog b/sci-biology/sibsim4/ChangeLog new file mode 100644 index 000000000..1adda3d67 --- /dev/null +++ b/sci-biology/sibsim4/ChangeLog @@ -0,0 +1,11 @@ +# ChangeLog for sci-biology/sibsim4 +# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + + 27 Apr 2007; Andrey Kislyuk <weaver@horizon.ath.cx> +sibsim4-0.14.ebuild: + Mass import from sunrise + + 18 Apr 2007; Andrey Kislyuk <weaver@horizon.ath.cx> +sibsim4-0.14.ebuild, + +metadata.xml: + new package (bug 175143) + diff --git a/sci-biology/sibsim4/Manifest b/sci-biology/sibsim4/Manifest new file mode 100644 index 000000000..786403ef3 --- /dev/null +++ b/sci-biology/sibsim4/Manifest @@ -0,0 +1,12 @@ +DIST SIBsim4-0.14.tar.gz 28956 RMD160 7e54d8973d750d80516c3cc2ce358230e3e8c4cf SHA1 ee4215b191b494074df4fe33088097e00e789393 SHA256 15c0493ddc21cb4086bcc2f72d6e7ac470256cd8d87605de359b59a853fb9596 +EBUILD sibsim4-0.14.ebuild 542 RMD160 272b1b10dbd5346f28615b60b3293084da1c968e SHA1 3ec8dd7a03def6ffca466ab4cb1c104694708834 SHA256 b2ce925f5529d246dc4bcd9744889e0f3bcc9be7ff4041c8b119694bfea8a07b +MD5 05729babe5c14d6cb34049e7d9de7696 sibsim4-0.14.ebuild 542 +RMD160 272b1b10dbd5346f28615b60b3293084da1c968e sibsim4-0.14.ebuild 542 +SHA256 b2ce925f5529d246dc4bcd9744889e0f3bcc9be7ff4041c8b119694bfea8a07b sibsim4-0.14.ebuild 542 +MISC ChangeLog 345 RMD160 9325a348a15d8f5693314b6e2c55a40be3d66714 SHA1 725565c3169dea448ce6cdef56d1f3d6ab0d0b7c SHA256 68b11bbc9c83e36066fb1ec03cc59749a874ea201be0ec09ac3b2e80c4b51b5c +MD5 871c1de0832334e8d9e1cae073be9cfe ChangeLog 345 +RMD160 9325a348a15d8f5693314b6e2c55a40be3d66714 ChangeLog 345 +SHA256 68b11bbc9c83e36066fb1ec03cc59749a874ea201be0ec09ac3b2e80c4b51b5c ChangeLog 345 +MD5 800b79024b4b386017dac71d76999d9f files/digest-sibsim4-0.14 235 +RMD160 7744aa21f20c76c2038c18d72045cffdd8467b45 files/digest-sibsim4-0.14 235 +SHA256 93ae4b12c5399bb383e443a5a1ef2c44bdac1ffcc2b014d819fef71c077ead08 files/digest-sibsim4-0.14 235 diff --git a/sci-biology/sibsim4/files/digest-sibsim4-0.14 b/sci-biology/sibsim4/files/digest-sibsim4-0.14 new file mode 100644 index 000000000..a431daadd --- /dev/null +++ b/sci-biology/sibsim4/files/digest-sibsim4-0.14 @@ -0,0 +1,3 @@ +MD5 b63af91d9cacf7d4f557d72119f934e5 SIBsim4-0.14.tar.gz 28956 +RMD160 7e54d8973d750d80516c3cc2ce358230e3e8c4cf SIBsim4-0.14.tar.gz 28956 +SHA256 15c0493ddc21cb4086bcc2f72d6e7ac470256cd8d87605de359b59a853fb9596 SIBsim4-0.14.tar.gz 28956 diff --git a/sci-biology/sibsim4/sibsim4-0.14.ebuild b/sci-biology/sibsim4/sibsim4-0.14.ebuild new file mode 100644 index 000000000..64ada6178 --- /dev/null +++ b/sci-biology/sibsim4/sibsim4-0.14.ebuild @@ -0,0 +1,27 @@ +# Copyright 1999-2007 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +DESCRIPTION="A rewrite and improvement upon sim4, a DNA-mRNA aligner" +HOMEPAGE="http://sibsim4.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/SIBsim4-${PV}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/SIBsim4-${PV}" + +src_unpack() { + unpack ${A} + sed -i 's/CFLAGS = \(.*\)/CFLAGS := \1 ${CFLAGS}/' ${S}/Makefile +} + +src_install() { + dobin SIBsim4 + doman SIBsim4.1 +} |