diff options
| author |   Martin Mokrejs <mmokrejs@gmail.com> | 2021-10-17 14:08:06 +0200 |
|---|---|---|
| committer | Martin Mokrejs <mmokrejs@gmail.com> | 2021-10-17 14:08:06 +0200 |
| commit | 12a8a79abb8942a51cd8e15db9668bd0683221d3 (patch) | |
| tree | 5629f66f1ce956130e126d969392a65c53e7474e /sci-biology/tigmint/tigmint-1.2.4.ebuild | |
| parent | dev-python/keyrings_alt: new package (diff) | |
| download | sci-12a8a79abb8942a51cd8e15db9668bd0683221d3.tar.gz sci-12a8a79abb8942a51cd8e15db9668bd0683221d3.tar.bz2 sci-12a8a79abb8942a51cd8e15db9668bd0683221d3.zip | |
sci-biology/tigmint: version bump, update SRC_URI
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Martin Mokrejs <mmokrejs@gmail.com>
Diffstat (limited to 'sci-biology/tigmint/tigmint-1.2.4.ebuild')
| -rw-r--r-- | sci-biology/tigmint/tigmint-1.2.4.ebuild | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/sci-biology/tigmint/tigmint-1.2.4.ebuild b/sci-biology/tigmint/tigmint-1.2.4.ebuild new file mode 100644 index 000000000..12a32bc2b --- /dev/null +++ b/sci-biology/tigmint/tigmint-1.2.4.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{7,8} ) + +inherit distutils-r1 + +DESCRIPTION="Correct misassemblies using linked reads from 10x Genomics Chromium" +HOMEPAGE="https://github.com/bcgsc/tigmint https://bcgsc.github.io/tigmint/" +SRC_URI="https://github.com/bcgsc/tigmint/releases/download/v${PV}/${P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +# TODO: fix this +# FileNotFoundError: [Errno 2] No such file or directory +# happens even with --install +RESTRICT="test" + +RDEPEND=" + dev-python/intervaltree[${PYTHON_USEDEP}] + sci-biology/pybedtools[${PYTHON_USEDEP}] + sci-biology/pysam[${PYTHON_USEDEP}] +" + +distutils_enable_tests pytest |