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| author |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-25 11:27:19 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-25 11:27:19 +0100 |
| commit | 1369d67182d9d6e00895f5895fea8511fff61d89 (patch) | |
| tree | c4c989e352a58b9baf33b626f0458e439c55f20e /sci-biology | |
| parent | sci-biology/trinityrnaseq: bump to 2.1.3.2 (diff) | |
| download | sci-1369d67182d9d6e00895f5895fea8511fff61d89.tar.gz sci-1369d67182d9d6e00895f5895fea8511fff61d89.tar.bz2 sci-1369d67182d9d6e00895f5895fea8511fff61d89.zip | |
sci-biology/symap: drop dead package
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/symap/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/symap/metadata.xml | 8 | ||||
| -rw-r--r-- | sci-biology/symap/symap-5.0.6.ebuild | 40 |
3 files changed, 0 insertions, 49 deletions
diff --git a/sci-biology/symap/Manifest b/sci-biology/symap/Manifest deleted file mode 100644 index 4e5ac6ea6..000000000 --- a/sci-biology/symap/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST symap-5.0.6.tar.gz 39447370 BLAKE2B 749769c36d7a46c11ab8bc874915b1dc2e4402b881c7f1fbd56353b4c0dc10cb20864c426c8bdb3ab28aa34d5f7d9bfbf8df66a99de34eebc13f3aa66b4a8d27 SHA512 356bebd7e1afeb78d00e748e1ec4488f180f1225aa3ca117b58cc381dc1d910241d54bc84d932ff6de955b6f4150043508fae6bc0f33c4486025aeb7deb010a8 diff --git a/sci-biology/symap/metadata.xml b/sci-biology/symap/metadata.xml deleted file mode 100644 index ae9640ffb..000000000 --- a/sci-biology/symap/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-biology/symap/symap-5.0.6.ebuild b/sci-biology/symap/symap-5.0.6.ebuild deleted file mode 100644 index 58b444b3d..000000000 --- a/sci-biology/symap/symap-5.0.6.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -DESCRIPTION="Synteny Mapping and Analysis Program" -HOMEPAGE="http://www.agcol.arizona.edu/software/symap/ https://github.com/csoderlund/SyMAP" -SRC_URI="https://github.com/csoderlund/SyMAP/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -# error: package netscape.javascript does not exist -KEYWORDS="" - -DEPEND=" - sci-biology/blat - sci-biology/mummer - sci-biology/muscle" -RDEPEND="${DEPEND} - >=virtual/jre-1.7:*" - -S="${WORKDIR}/SyMAP-${PV}/java" - -src_unpack() { - default - cd "${S}" - tar xvf classes_ext.tar.gz - cd ../ - tar xvf ext.tar.gz -} - -src_prepare() { - default - sed -e 's/#JAVA_PATH=\/usr/JAVA_PATH=\/usr/g' -i Makefile || die -} - -src_compile() { - emake class_dirs - emake -} |