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| author |   Justin Lecher <jlec@gentoo.org> | 2016-12-17 19:11:22 +0100 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2016-12-17 19:11:22 +0100 |
| commit | 38747acc6b11e00d4c075a07a026a6de0c6e521a (patch) | |
| tree | 06399075b8cc94808d425e51cbc0b2ac05b34103 /sci-biology | |
| parent | Merge remote-tracking branch 'github/master' (diff) | |
| download | sci-38747acc6b11e00d4c075a07a026a6de0c6e521a.tar.gz sci-38747acc6b11e00d4c075a07a026a6de0c6e521a.tar.bz2 sci-38747acc6b11e00d4c075a07a026a6de0c6e521a.zip | |
License missing and fetch restricted
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/annovar/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/annovar/annovar-20160201.ebuild | 38 | ||||
| -rw-r--r-- | sci-biology/annovar/metadata.xml | 12 |
3 files changed, 0 insertions, 52 deletions
diff --git a/sci-biology/annovar/Manifest b/sci-biology/annovar/Manifest deleted file mode 100644 index ecddd8181..000000000 --- a/sci-biology/annovar/Manifest +++ /dev/null @@ -1,2 +0,0 @@ -DIST annovar-20160201.tar.gz 47279264 SHA256 2ca9099cff8fc3817ce2f2984d0f2393c715c03c9cad2275a0b170f4e3a3ebde SHA512 04b39b608f8070bb221cbfa54adbac8f8018a32ed2810cf5e3b08926cb4c38044e4d046d61ecd8fa98728eec9d8a52d3b8504abb54dbca247e5d393ec149efbc WHIRLPOOL c1c2437050fb9cb1b30480309c33b24670419f329257ddb050422cd6dfe79954245e6103978b05f111a94160d323793f3f026258cf9e76bd23295bdef3de5833 -DIST annovar-20160201_table_annovar.pl 35152 SHA256 c62b39c9e4fad757ec5cc2213691376ea3c87a11e81aa2a3222eef6ccbc4fd76 SHA512 20d2822b81d2aad3fd80c680f4442516649a05399fcc7e53fc3da1ce88e994f698bbfee0aafea8f2edf437a7eb077939735d7f3b91778a138bcd8336e0cd314f WHIRLPOOL d2036abecf29e89979b16b744010ac65cac805e6b68274f30e813e899336d1c483f51ac02a67450e6ab69521630d961cce8a9db881fdb54cc1e85177cb205653 diff --git a/sci-biology/annovar/annovar-20160201.ebuild b/sci-biology/annovar/annovar-20160201.ebuild deleted file mode 100644 index 79ddbd1d0..000000000 --- a/sci-biology/annovar/annovar-20160201.ebuild +++ /dev/null @@ -1,38 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=6 - -DESCRIPTION="Annotate variation data in input VCF files" -HOMEPAGE="http://annovar.openbioinformatics.org" -SRC_URI="annovar-20160201.tar.gz - annovar-20160201_table_annovar.pl" - -LICENSE="annovar_personal_only" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="dev-lang/perl - ${DEPEND}" - -RESTRICT="fetch" - -S="${WORKDIR}"/"${PN}" - -pkg_nofetch() { - einfo "Please visit ${HOMEPAGE} and obtain the file" - einfo "\"${P}.tar.gz\" and place it in ${DISTDIR}." - einfo "Also fetch an updated version of http://www.openbioinformatics.org/annovar/download/table_annovar.pl" - einfo "and place it into ${DISTDIR} as ${P}__table_annovar.pl." -} - -src_install(){ - dobin *.pl - # install a "patch" from table_annovar.pl - newbin "${DISTDIR}"/${P}_table_annovar.pl table_annovar.pl - insinto /usr/share/"${PN}" - doins -r example humandb -} diff --git a/sci-biology/annovar/metadata.xml b/sci-biology/annovar/metadata.xml deleted file mode 100644 index f68a1b6fa..000000000 --- a/sci-biology/annovar/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata> |