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| author |   Justin Lecher <jlec@gentoo.org> | 2015-09-23 12:19:39 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2015-09-23 12:19:39 +0200 |
| commit | a114d80f850c5d384988fd4120f7666fdb922151 (patch) | |
| tree | 91b993d6a5692905cf0751cecf579002d11c337f /sci-biology | |
| parent | sci-biology/bambus: Drop unnecessary dep on python (diff) | |
| download | sci-a114d80f850c5d384988fd4120f7666fdb922151.tar.gz sci-a114d80f850c5d384988fd4120f7666fdb922151.tar.bz2 sci-a114d80f850c5d384988fd4120f7666fdb922151.zip | |
sci-biology/scaffold_builder: Properly use install python scripts
Package-Manager: portage-2.2.21
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/scaffold_builder/scaffold_builder-20131122-r1.ebuild (renamed from sci-biology/scaffold_builder/scaffold_builder-20131122.ebuild) | 26 |
1 files changed, 16 insertions, 10 deletions
diff --git a/sci-biology/scaffold_builder/scaffold_builder-20131122.ebuild b/sci-biology/scaffold_builder/scaffold_builder-20131122-r1.ebuild index f6358fe90..5e57eb5dd 100644 --- a/sci-biology/scaffold_builder/scaffold_builder-20131122.ebuild +++ b/sci-biology/scaffold_builder/scaffold_builder-20131122-r1.ebuild @@ -4,12 +4,16 @@ EAPI=5 -S="${WORKDIR}" +PYTHON_COMPAT=( python2_7 ) + +inherit python-r1 DESCRIPTION="Combine FASTA contigs from a de novo assembly into scaffolds using a reference assembly" -HOMEPAGE="http://sourceforge.net/projects/scaffold-b +HOMEPAGE=" + http://sourceforge.net/projects/scaffold-b http://edwards.sdsu.edu/scaffold_builder" -SRC_URI="http://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v2.1.zip +SRC_URI=" + http://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v2.1.zip http://sourceforge.net/projects/scaffold-b/files/scaffold_builder_v2_help.doc http://downloads.sourceforge.net/project/scaffold-b/Manual_v2.1.pdf" @@ -19,17 +23,19 @@ SLOT="0" KEYWORDS="~amd64" IUSE="" -DEPEND="" -RDEPEND="${DEPEND} - sci-biology/mummer - dev-lang/python" +REQUIRED_USE="${PYTHON_REQUIRED_USE}" + +RDEPEND="${PYTHON_DEPS} + sci-biology/mummer" +DEPEND="${RDEPEND}" + +S="${WORKDIR}" src_install(){ echo "#! /usr/bin/env python" > scaffold_builder.pyy || die cat scaffold_builder.py >> scaffold_builder.pyy || die mv scaffold_builder.pyy scaffold_builder.py || die - dobin scaffold_builder.py + python_foreach_impl python_doscript scaffold_builder.py dodoc "${DISTDIR}"/scaffold_builder_v2_help.doc - cp -p "${DISTDIR}"/Manual_v2.1.pdf scaffold_builder.pdf || die - dodoc scaffold_builder.pdf + newdoc "${DISTDIR}"/Manual_v2.1.pdf scaffold_builder.pdf } |