sci-biology/samri: drop 0.5, 0.5.1

Signed-off-by: Horea Christian <chr@chymera.eu>

3 files changed, 0 insertions, 144 deletions

diff --git a/sci-biology/samri/Manifest b/sci-biology/samri/Manifest
index cc33bac33..e7a32654a 100644
--- a/sci-biology/samri/Manifest
+++ b/sci-biology/samri/Manifest
@@ -1,3 +1 @@
-DIST samri-0.5.1.tar.gz 4121957 BLAKE2B d333067df408f2e60c65b4706f934d436cd8a86bc6eabf8321ecb6f4fe44d88f88deaccb3307d1d275ef1cf3d11b78d530cc56c92944255a00d7ca13173ecac7 SHA512 a702a0ed99d0ed753faeeb41b52b038623c0907a4ff5f573100f019683976bf2c90fc97476fe4c7829c4804d2c13054f0745b631cb9f03e2839e6970f327f179
 DIST samri-0.5.2.tar.gz 4121974 BLAKE2B 90082530434f1854b0caadaf1c2e5e9cf77c43218ef68be8b3b656d9d4d8a17c3128a0b81dfd7118e1ca8c9aefb21f264ccd0cf5cb7a6954b519850bef4be196 SHA512 fe2444d86be4d1ba16ceecbdb2d1e27e53d6bd2a3e42f6b6680a818b853da6cc77fe7378973b4574479245658be932ada46a7a99a2d05748d36c291e4319d732
-DIST samri-0.5.tar.gz 4117149 BLAKE2B 1767d6d07726431e43dad5f843eee04bd5111dde3174905b79b938aa94dbb340ca3f3d6316c6720bf01212b87c895df47c965738dff70ec1debbbd542bb77043 SHA512 94fb981adf78b2062e1beac8433bca34e3db90964f720918603e2b89d617b4dfe9f4bc1591b6953e060553ea0014ebca4db62aa0f5b264feb084bc785a48c367
diff --git a/sci-biology/samri/samri-0.5.1.ebuild b/sci-biology/samri/samri-0.5.1.ebuild
deleted file mode 100644
index a20c63f61..000000000
--- a/sci-biology/samri/samri-0.5.1.ebuild
+++ /dev/null
@@ -1,71 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_10 )
-
-inherit distutils-r1 prefix
-
-DESCRIPTION="Small Animal Magnetic Resonance Imaging"
-HOMEPAGE="https://github.com/IBT-FMI/SAMRI"
-SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz"
-S="${WORKDIR}/SAMRI-${PV}"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="+atlases labbookdb"
-REQUIRED_USE="test? ( atlases )"
-
-DEPEND="
-	test? (
-		sci-biology/samri_bidsdata
-		sci-biology/samri_bindata
-		)
-	"
-RDEPEND="
-	dev-python/argh[${PYTHON_USEDEP}]
-	dev-python/joblib[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-2.0.2[${PYTHON_USEDEP}]
-	>=dev-python/numpy-1.13.3[${PYTHON_USEDEP}]
-	dev-python/pandas[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/seaborn[${PYTHON_USEDEP}]
-	dev-python/statsmodels[${PYTHON_USEDEP}]
-	>=media-gfx/blender-2.83.4
-	>=sci-biology/fsl-5.0.9
-	sci-biology/bru2nii
-	atlases? ( sci-biology/mouse-brain-templates )
-	labbookdb? ( sci-libs/labbookdb[${PYTHON_USEDEP}] )
-	sci-libs/nibabel[${PYTHON_USEDEP}]
-	>=sci-libs/nipy-0.4.1[${PYTHON_USEDEP}]
-	>=sci-libs/nipype-1.0.0[${PYTHON_USEDEP}]
-	<sci-libs/pybids-0.10.2[${PYTHON_USEDEP}]
-	sci-libs/scikit-image[${PYTHON_USEDEP}]
-	sci-biology/ants
-	sci-biology/afni
-	sci-biology/nilearn[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest
-distutils_enable_sphinx doc/source dev-python/sphinxcontrib-napoleon
-
-src_prepare() {
-	distutils-r1_src_prepare
-	sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ samri` || die
-	sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ test_scripts.sh` || die
-	eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX samri/* test_scripts.sh)
-}
-
-python_test() {
-	distutils_install_for_testing
-	export MPLBACKEND="agg"
-	export PATH=${TEST_DIR}/scripts:$PATH
-	export PYTHONIOENCODING=utf-8
-	./test_scripts.sh || die "Test scripts failed."
-	sed -i -e \
-		"/def test_bru2bids():/i@pytest.mark.skip('Removed in full test suite, as this is already tested in `test_scripts.sh`')" \
-		samri/pipelines/tests/test_repos.py || die
-	epytest -k "not longtime"
-}
diff --git a/sci-biology/samri/samri-0.5.ebuild b/sci-biology/samri/samri-0.5.ebuild
deleted file mode 100644
index a20c63f61..000000000
--- a/sci-biology/samri/samri-0.5.ebuild
+++ /dev/null
@@ -1,71 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_10 )
-
-inherit distutils-r1 prefix
-
-DESCRIPTION="Small Animal Magnetic Resonance Imaging"
-HOMEPAGE="https://github.com/IBT-FMI/SAMRI"
-SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz"
-S="${WORKDIR}/SAMRI-${PV}"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="+atlases labbookdb"
-REQUIRED_USE="test? ( atlases )"
-
-DEPEND="
-	test? (
-		sci-biology/samri_bidsdata
-		sci-biology/samri_bindata
-		)
-	"
-RDEPEND="
-	dev-python/argh[${PYTHON_USEDEP}]
-	dev-python/joblib[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-2.0.2[${PYTHON_USEDEP}]
-	>=dev-python/numpy-1.13.3[${PYTHON_USEDEP}]
-	dev-python/pandas[${PYTHON_USEDEP}]
-	dev-python/scipy[${PYTHON_USEDEP}]
-	dev-python/seaborn[${PYTHON_USEDEP}]
-	dev-python/statsmodels[${PYTHON_USEDEP}]
-	>=media-gfx/blender-2.83.4
-	>=sci-biology/fsl-5.0.9
-	sci-biology/bru2nii
-	atlases? ( sci-biology/mouse-brain-templates )
-	labbookdb? ( sci-libs/labbookdb[${PYTHON_USEDEP}] )
-	sci-libs/nibabel[${PYTHON_USEDEP}]
-	>=sci-libs/nipy-0.4.1[${PYTHON_USEDEP}]
-	>=sci-libs/nipype-1.0.0[${PYTHON_USEDEP}]
-	<sci-libs/pybids-0.10.2[${PYTHON_USEDEP}]
-	sci-libs/scikit-image[${PYTHON_USEDEP}]
-	sci-biology/ants
-	sci-biology/afni
-	sci-biology/nilearn[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest
-distutils_enable_sphinx doc/source dev-python/sphinxcontrib-napoleon
-
-src_prepare() {
-	distutils-r1_src_prepare
-	sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI \'/usr/ samri` || die
-	sed -i -e "s:/usr:@GENTOO_PORTAGE_EPREFIX@/usr:g" `grep -rlI /usr/ test_scripts.sh` || die
-	eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX samri/* test_scripts.sh)
-}
-
-python_test() {
-	distutils_install_for_testing
-	export MPLBACKEND="agg"
-	export PATH=${TEST_DIR}/scripts:$PATH
-	export PYTHONIOENCODING=utf-8
-	./test_scripts.sh || die "Test scripts failed."
-	sed -i -e \
-		"/def test_bru2bids():/i@pytest.mark.skip('Removed in full test suite, as this is already tested in `test_scripts.sh`')" \
-		samri/pipelines/tests/test_repos.py || die
-	epytest -k "not longtime"
-}