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authorAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-01-19 12:00:09 +0100
committerAndrew Ammerlaan <andrewammerlaan@riseup.net>2021-01-19 12:00:21 +0100
commitb6ef36018a0a32895771f0ce4268d4fdd2a65323 (patch)
tree984708d53af69b5b94614bca11ee97a774dd812f /sci-biology
parentsci-biology/MuSeqBox: version bump, fix fetch (diff)
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sci-biology/mrsfast: fix fetch, version bump
Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/mrsfast/Manifest2
-rw-r--r--sci-biology/mrsfast/mrsfast-3.4.2.ebuild (renamed from sci-biology/mrsfast/mrsfast-2.6.0.4.ebuild)14
2 files changed, 8 insertions, 8 deletions
diff --git a/sci-biology/mrsfast/Manifest b/sci-biology/mrsfast/Manifest
index 0a8a14be2..b6da5c3dd 100644
--- a/sci-biology/mrsfast/Manifest
+++ b/sci-biology/mrsfast/Manifest
@@ -1 +1 @@
-DIST mrsfast-2.6.0.4.zip 38384 SHA256 695f65788096098259fd86e1269b32918cf9d717a7ba722c99fbdcc5270924c5 SHA512 df14dfb4c5d0d4ad2da26f47f7d10ff94e2857519aace4f11914dc9be09cc937168e63396b5523f992ff49b826a6ec565998eb220f840982febbc26f32345ab9 WHIRLPOOL aa4570bfac2708e910cce778a6ba74c27dc41be7ec49702d73cfd63e17c780be28d245c57de63a9f355549e08a23878ec1157c4d08119073d0805567ec6a0a2d
+DIST mrsfast-3.4.2.tar.gz 47451 BLAKE2B e8dc3d06ec53d036ef2b556fc536b5430c6bc392846341e86afcd3131f38cc2ac2a642e8f4cf97e2bb56039604b18e839f0bc3803665a713cdb13374eee0fb46 SHA512 3ca0e166a165b338a3949fea1f80c6e3f228e36663af3cd6de57eb22ac05fa0d8a4c5fa8c2ca5ee5ce8cfe17d7df05362f26a9ae77f9d117ea256461a3c3e9a0
diff --git a/sci-biology/mrsfast/mrsfast-2.6.0.4.ebuild b/sci-biology/mrsfast/mrsfast-3.4.2.ebuild
index bdd86b273..91f7d771c 100644
--- a/sci-biology/mrsfast/mrsfast-2.6.0.4.ebuild
+++ b/sci-biology/mrsfast/mrsfast-3.4.2.ebuild
@@ -1,20 +1,20 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
-inherit eutils toolchain-funcs
+inherit toolchain-funcs
DESCRIPTION="Micro Read Fast Alignment Search Tool"
-HOMEPAGE="http://mrsfast.sourceforge.net/Home"
-SRC_URI="mirror://sourceforge/mrsfast/${PV}/${P}.zip"
+HOMEPAGE="https://sfu-compbio.github.io/mrsfast/"
+SRC_URI="https://github.com/sfu-compbio/mrsfast/archive/v${PV}.tar.gz -> ${P}.tar.gz"
LICENSE="BSD"
SLOT="0"
-IUSE=""
-KEYWORDS="~amd64"
+KEYWORDS=""
src_prepare() {
+ default
sed \
-e "s:gcc:$(tc-getCC) ${LDFLAGS}:g" \
-e '/^CFLAGS/d' \