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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-10 02:00:37 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-10 02:00:37 +0100 |
| commit | cbe0d928b5c7dbe615e129da4d5079f46324aef8 (patch) | |
| tree | f801d330eb515c4558f7ee9af34f919e808204f5 /sci-biology | |
| parent | sci-biology/idba: distinguish openmp cflags, fix compile and install steps (diff) | |
| download | sci-cbe0d928b5c7dbe615e129da4d5079f46324aef8.tar.gz sci-cbe0d928b5c7dbe615e129da4d5079f46324aef8.tar.bz2 sci-cbe0d928b5c7dbe615e129da4d5079f46324aef8.zip | |
sci-biology/megahit: distinguish openmp compiler switches
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/megahit/megahit-9999.ebuild | 14 |
1 files changed, 13 insertions, 1 deletions
diff --git a/sci-biology/megahit/megahit-9999.ebuild b/sci-biology/megahit/megahit-9999.ebuild index def7fd6e0..a23d2c23b 100644 --- a/sci-biology/megahit/megahit-9999.ebuild +++ b/sci-biology/megahit/megahit-9999.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2016 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -23,8 +23,20 @@ RDEPEND="${DEPEND} # use make use_gpu=1 to compile it and turn on --use-gpu to activate GPU acceleration when running megahit +pkg_setup() { + use openmp && ! tc-has-openmp && die "Please switch to an openmp compatible compiler" +} + src_prepare(){ default + if [[ $(tc-getCXX) =~ g++ ]]; then + local eopenmp=-fopenmp + elif [[ $(tc-getCXX) =~ cxx ]]; then + local eopenmp=-openmp + sed -e "s#-fopenmp#-openmp#" -i Makefile || die + else + elog "Cannot detect compiler type so not setting openmp support" + fi sed -e "s#^CXXFLAGS = -g -O2#CXXFLAGS = ${CFLAGS}#" -i Makefile || die } |