diff options
| author |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-26 11:02:49 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-26 11:02:49 +0100 |
| commit | d703c5a43cf46b3e7228f8beaeb66b7bba525638 (patch) | |
| tree | 48b827e6dcc8335fa6e7bc376e3557373f47e432 /sci-biology | |
| parent | sci-astronomy/libthesky: relax dependency (diff) | |
| download | sci-d703c5a43cf46b3e7228f8beaeb66b7bba525638.tar.gz sci-d703c5a43cf46b3e7228f8beaeb66b7bba525638.tar.bz2 sci-d703c5a43cf46b3e7228f8beaeb66b7bba525638.zip | |
sci-biology/bambus: fix PMS violation
Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bambus/bambus-2.33-r2.ebuild (renamed from sci-biology/bambus/bambus-2.33-r1.ebuild) | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/sci-biology/bambus/bambus-2.33-r1.ebuild b/sci-biology/bambus/bambus-2.33-r2.ebuild index 1e2078c94..475c7f0b1 100644 --- a/sci-biology/bambus/bambus-2.33-r1.ebuild +++ b/sci-biology/bambus/bambus-2.33-r2.ebuild @@ -66,11 +66,12 @@ src_prepare() { einfo "bambus-2.33/src/TIGR_Foundation_CC/OptionResult.cc:/*! Uses same syntax as getopt" #rm -rf src/TIGR_Foundation_CC || die "Failed to rm -rf src/TIGR_Foundation_CC/, we use it from sci-biology/tigr-foundation-libs" #sed -i 's:TIGR_Foundation_CC::' src/Makefile || die "Failed to zap last pointer to local copy of tigr-foundation-libs" - cd src/TIGR_Foundation_CC || die "Failed to cd src/TIGR_Foundation_CC/" - sed -e "s:/export/usr/local:${ED}/usr:g" -i Makefile || die } src_install() { + pushd src/TIGR_Foundation_CC || die + sed -e "s:/export/usr/local:${ED}/usr:g" -i Makefile || die + popd || die emake DESTDIR="${ED}/usr" install # cvs HEAD of amos now contains even more updated files: /usr/bin/printScaff /usr/bin/untangle /usr/lib/TIGR/AsmLib.pm for f in FASTArecord.pm FASTAreader.pm Foundation.pm FASTAgrammar.pm AsmLib.pm; do rm "${ED}"/usr/lib/TIGR/$f; done || die |