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| author |   Justin Lecher (jlec) <jlec@j-schmitz.net> | 2010-01-12 09:49:35 +0100 |
|---|---|---|
| committer | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2010-01-12 09:49:35 +0100 |
| commit | df9fe09885b355e58d6f1035669310fffe8cf964 (patch) | |
| tree | 9d42f4395d49682aff3506bc18fa11de2509c3a0 /sci-biology | |
| parent | sci-biology/psipred -- adopted to new blast-db (diff) | |
| download | sci-df9fe09885b355e58d6f1035669310fffe8cf964.tar.gz sci-df9fe09885b355e58d6f1035669310fffe8cf964.tar.bz2 sci-df9fe09885b355e58d6f1035669310fffe8cf964.zip | |
sci-biology/psipred -- exprefixed
(Portage version: 2.2_rc61/git/Linux i686)
(Signed Manifest commit)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/psipred/Manifest | 10 | ||||
| -rw-r--r-- | sci-biology/psipred/files/2.6.1-path.patch | 8 | ||||
| -rw-r--r-- | sci-biology/psipred/psipred-2.6.1.ebuild | 6 |
3 files changed, 14 insertions, 10 deletions
diff --git a/sci-biology/psipred/Manifest b/sci-biology/psipred/Manifest index e90bd35cb..25ce4c70d 100644 --- a/sci-biology/psipred/Manifest +++ b/sci-biology/psipred/Manifest @@ -2,15 +2,15 @@ Hash: SHA1 AUX 2.6.1-Makefile.patch 1295 RMD160 38eb08b77f15db26d60eb9ad5b603df3927f9471 SHA1 4aa02b3f7868e113501538da5cc88b80987029b4 SHA256 f50dc85ad2e630fbe8e3a15315cd7dca0e0349a7e8e83d80b36fb9a4cf7a3d97 -AUX 2.6.1-path.patch 994 RMD160 00fd766bdeed4eb967848fd913304d6dbd4b10b4 SHA1 c46fdc101685e076eb5b332ce74b19df872239c8 SHA256 c84a0d6efb147a4125a4a04fb6eba59ca9eaf77edbeaadfa190acb9702e54a8b +AUX 2.6.1-path.patch 1022 RMD160 bc459d82cec4fe474c510877f0e203dc2c38d744 SHA1 596ee1c094960aab6ae3bab79d4eae0bb2313a1a SHA256 445104470056b15628d794591394ac12ee1a1ea58cffdec6187d3716a20e2e34 DIST psipred261.tar.gz 873613 RMD160 744e984a21145b6caf312f68de66501ba0ac2d39 SHA1 db3af95091ed745fc956153239016d042e44b62d SHA256 0b39c075493d43e63952535dfed5341d0b81a99e4fb72d5431676d657d027126 -EBUILD psipred-2.6.1.ebuild 1090 RMD160 2b50e7e32388bd8e662597c2ea1eeed8f1a5da28 SHA1 a6a764f1a6fe0c7842ad67655aa6efd7f9c24bba SHA256 9c42eab9a300869159703296bccc2b713c878582e92f3696c1ab0f35f297294b +EBUILD psipred-2.6.1.ebuild 1185 RMD160 036163c360b1a017a39d88cb92f893ec45d5c55c SHA1 cef866ec98e67323fb23f71b8648ac891235d6e0 SHA256 65f9c2feec1fc678b2ee8c4112999cf89397f0ffb2b49aacbe00a14ce3236b5a MISC ChangeLog 437 RMD160 740ace4747935f1f792ff97f1e6ee75501d08b7b SHA1 aae1925586d6b44659663d39ed6bed0cfddd3af2 SHA256 43fd62035dd644e1e4f7e9838499ebd4f40779143e780662529ea1c0bbbaabdc MISC metadata.xml 215 RMD160 bc9c07aa91f2f175542244e4e4522a73558210a1 SHA1 facb283386de1c0b6b938cdcd4dde04d1694298b SHA256 13f32353652adbd3d934d41381cfc2cacc9e1127c508cebc73806cc1026ee80c -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.11 (GNU/Linux) -iEYEARECAAYFAktMMwMACgkQgAnW8HDreRbz9ACgsqXE9iaICUn4WjuPXPvKWiUl -2aIAnA1/nl7AyqvKlKla1ItAaQrrdhJD -=/7/1 +iEYEARECAAYFAktMN58ACgkQgAnW8HDreRavUgCfRAHspfTCWdGTWKA8i3fzw47U +2WAAn0kVPi8Qc7FXXtlP5gLNfRnPEpbZ +=Ua8u -----END PGP SIGNATURE----- diff --git a/sci-biology/psipred/files/2.6.1-path.patch b/sci-biology/psipred/files/2.6.1-path.patch index 8956c5951..44da2053c 100644 --- a/sci-biology/psipred/files/2.6.1-path.patch +++ b/sci-biology/psipred/files/2.6.1-path.patch @@ -5,7 +5,7 @@ # Where the NCBI programs have been installed -set ncbidir = /usr/local/bin -+set ncbidir = /usr/bin ++set ncbidir = EPREFIX/usr/bin # Where the PSIPRED V2 programs have been installed -set execdir = ./bin @@ -13,7 +13,7 @@ # Where the PSIPRED V2 data files have been installed -set datadir = ./data -+set datadir = /usr/share/psipred/data ++set datadir = EPREFIX/usr/share/psipred/data set basename = $1:r set rootname = $basename:t @@ -24,11 +24,11 @@ # Where the PSIPRED V2 programs have been installed -set execdir = ./bin -+set execdir = /usr/bin ++set execdir = EPREFIX/usr/bin # Where the PSIPRED V2 data files have been installed -set datadir = ./data -+set datadir = /usr/share/psipred/data ++set datadir = EPREFIX/usr/share/psipred/data set basename = $1:r set rootname = $basename:t diff --git a/sci-biology/psipred/psipred-2.6.1.ebuild b/sci-biology/psipred/psipred-2.6.1.ebuild index b27bc8a3b..8210b1803 100644 --- a/sci-biology/psipred/psipred-2.6.1.ebuild +++ b/sci-biology/psipred/psipred-2.6.1.ebuild @@ -25,7 +25,11 @@ S="${WORKDIR}" src_prepare() { epatch "${FILESDIR}"/${PV}-Makefile.patch - epatch "${FILESDIR}"/${PV}-path.patch + sed \ + -e "s:EPREFIX:${EPREFIX}:g" \ + "${FILESDIR}"/${PV}-path.patch \ + > "${T}"/${PV}-path.patch + epatch "${T}"/${PV}-path.patch } src_compile() { |