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| author |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-14 11:06:05 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2022-01-14 11:06:05 +0100 |
| commit | f4a2efc5cc14bdcde3643e259fc069af29818570 (patch) | |
| tree | f6f186d37fc48a7ae37bc78025d6e01cbc8c4649 /sci-biology | |
| parent | package.mask: mask terra for removal (diff) | |
| download | sci-f4a2efc5cc14bdcde3643e259fc069af29818570.tar.gz sci-f4a2efc5cc14bdcde3643e259fc069af29818570.tar.bz2 sci-f4a2efc5cc14bdcde3643e259fc069af29818570.zip | |
sci-biology/jellyfish: fix configure phase, add missing deps
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/jellyfish/jellyfish-2.3.0.ebuild | 12 |
1 files changed, 4 insertions, 8 deletions
diff --git a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild index 7a8176f75..e8e3c8fd0 100644 --- a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild +++ b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild @@ -3,8 +3,6 @@ EAPI=7 -inherit autotools - DESCRIPTION="k-mer counter within reads for assemblies" HOMEPAGE="http://www.genome.umd.edu/jellyfish.html" SRC_URI="https://github.com/gmarcais/Jellyfish/releases/download/v${PV}/${P}.tar.gz" @@ -16,15 +14,13 @@ SLOT="2" KEYWORDS="~amd64 ~x86" IUSE="cpu_flags_x86_sse" -DEPEND="" +RDEPEND=" + sci-biology/samtools:0 + sci-libs/htslib +" DEPEND="${RDEPEND}" BDEPEND="virtual/pkgconfig" -src_prepare(){ - eautoreconf - default -} - # TODO: enable compilation of Bindings to Ruby, Python and Perl # '--enable-ruby-binding', '--enable-python-binding' or '--enable-perl-binding', '--enable-swig' src_configure(){ |