sci-chemistry/azara and sci-chemistry/ccpn added to overlay

1 files changed, 76 insertions, 0 deletions

diff --git a/sci-chemistry/azara/azara-2.7.ebuild b/sci-chemistry/azara/azara-2.7.ebuild
new file mode 100644
index 000000000..3e41f19f2
--- /dev/null
+++ b/sci-chemistry/azara/azara-2.7.ebuild
@@ -0,0 +1,76 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+inherit eutils
+
+DESCRIPTION="A suite of programmes to process and view NMR data"
+HOMEPAGE="http://www.bio.cam.ac.uk/azara/"
+SRC_URI="http://www.bio.cam.ac.uk/ccpn/download/${PN}/${P}-src.tar.gz"
+
+LICENSE="AZARA"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+IUSE="opengl X xpm"
+RDEPEND=""
+DEPEND="${RDEPEND}
+	xpm? ( x11-libs/libXpm )
+	X? ( x11-libs/libX11 )"
+
+src_unpack() {
+	unpack "${A}"
+	cd "${S}"
+
+	echo "" > ENVIRONMENT
+
+	epatch "${FILESDIR}"/help-makefile.patch
+}
+
+
+src_compile() {
+
+	local mymake
+	local XPMUSE
+
+	mymake="${mymake} help nongui"
+	use X && mymake="${mymake} gui"
+	use opengl && mymake="${mymake} gl"
+	use xpm && XPMUSE="XPM_FLAG=-DUSE_XPM XPM_LIB=-lXpm"
+
+	emake -j1 CC=$(tc-getCC) \
+		CFLAGS="${CFLAGS}" \
+		LDFLAGS="${LDFLAGS}" \
+		MATH_LIB="-lm" \
+		X11_INCLUDE_DIR="-I/usr/X11R6/include" \
+		MOTIF_INCLUDE_DIR="-I/usr/include" \
+		X11_LIB_DIR="-L/usr/$(get_libdir)" \
+		MOTIF_LIB_DIR="-L/usr/$(get_libdir)" \
+		${XPMUSE} \
+		X11_LIB="-lX11" \
+		MOTIF_LIB="-lXm -lXt" \
+		GL_INCLUDE_DIR="-I/usr/X11R6/include -I/usr/include" \
+		GL_LIB_DIR="-I/usr/lib" \
+		GL_LIB="-lglut -lGLU -lGL -lXmu -lX11 -lXext" \
+		ENDIAN_FLAG="-DLITTLE_ENDIAN_DATA" \
+		${mymake} || \
+	die "make failed"
+
+}
+
+src_install() {
+
+	for bin in bin/*; do
+		dobin "${bin}" || die "failed to install ${bin}"
+	done
+
+	mv "${D}"/usr/bin/{,azara-}extract || die "failed to fix extract collision"
+
+	dodoc CHANGES* README*
+	dohtml html/*
+}
+
+pkg_postinst() {
+	einfo "Due to collision we moved the extract binary to azara-extract"
+}