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authorJustin Lecher (jlec) <jlec@j-schmitz.net>2009-09-11 21:09:35 +0200
committerJustin Lecher (jlec) <jlec@j-schmitz.net>2009-09-13 22:16:43 +0200
commit1e311ae4561f81a669628f0b7143e3a100471596 (patch)
tree97e2127e636d56a741a0af9700a556f8904e6226 /sci-chemistry/coot
parentNew package, ebuild written by me (diff)
downloadsci-1e311ae4561f81a669628f0b7143e3a100471596.tar.gz
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sci-1e311ae4561f81a669628f0b7143e3a100471596.zip
prelimary src_test fix
Diffstat (limited to 'sci-chemistry/coot')
-rw-r--r--sci-chemistry/coot/ChangeLog4
-rw-r--r--sci-chemistry/coot/Manifest5
-rw-r--r--sci-chemistry/coot/coot-9999.ebuild1
-rw-r--r--sci-chemistry/coot/files/9999-test-rama.patch18
4 files changed, 26 insertions, 2 deletions
diff --git a/sci-chemistry/coot/ChangeLog b/sci-chemistry/coot/ChangeLog
index d4e382fad..a08af06de 100644
--- a/sci-chemistry/coot/ChangeLog
+++ b/sci-chemistry/coot/ChangeLog
@@ -2,6 +2,10 @@
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+ 11 Sep 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
+ +files/9999-test-rama.patch, coot-9999.ebuild:
+ added patch to correct rama-data dir location for src_test
+
10 Sep 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
files/9999-as-needed.patch, coot-9999.ebuild:
src_test is functional now in 9999
diff --git a/sci-chemistry/coot/Manifest b/sci-chemistry/coot/Manifest
index 8736e7e8f..92ead5fd6 100644
--- a/sci-chemistry/coot/Manifest
+++ b/sci-chemistry/coot/Manifest
@@ -6,6 +6,7 @@ AUX 0.6_pre1-gcc4.4.patch 257 RMD160 d1ec251cda36ac201a8baa84d7dad542e72e0c7b SH
AUX 9999-as-needed.patch 18539 RMD160 2596dac3eb33e1704f84a11613fdc52c42fe8765 SHA1 b6d932312e38d7822866df6449226d90ea1c38c3 SHA256 1646003be0db635ff9b9ef7726adb06f4da8de8a4dbe77baa5074ec8a2faa68a
AUX 9999-check-include.patch 833 RMD160 7b877f8973b06119779518b433b607665930a382 SHA1 c8a0c80d3a3f5e85592c9925b35c6d5462fc36ad SHA256 98a6c8ef47953501e360b1bdd568ac99d5a53749738d940939e9f6a47cf85cd1
AUX 9999-gcc4.4.patch 299 RMD160 75374bd38981d4383d926a3b6529ef955a18e893 SHA1 e05d1caeb3dd13d101d417e7f2613402b6712005 SHA256 02c18e695086d70152b923af5d0aecd334bc18f1b6b955d3133c2ae7b6f218af
+AUX 9999-test-rama.patch 468 RMD160 611f3c55f6e34100d813590f601b354f8fe6d92c SHA1 67e30017e4063bbcdff19dc0be1a84d84fb1c057 SHA256 b1acdcaea5ce68d2ab118d87ad59624092f2e9f1724f094e1c180b79925891ec
AUX fix-namespace-error.patch 1081 RMD160 ebecd51b87c39dc2c37e565f18fc88b7aa837d05 SHA1 f732df5f4795e728bdf217aac9c9f53952e2890c SHA256 fd271dd22eec5725fcbd20c68b57008eed0f435d1e0ac212fbfd389a0a970beb
AUX glib.m4 8444 RMD160 f3f4b2987796f16d17758f2af3459279351d6f2c SHA1 201eb58c2b3f3c5395dacd3913a4fb9d950d3276 SHA256 ada4a0a46bd00eda39afe77f675b721f60cd20c0080170848f4d7e92b4ba4dc8
AUX gtk.m4 8516 RMD160 3860fe211902d5b9290f0a70e7d75ebec6b0ec67 SHA1 98b93b820423a52ebd80e3f1822a8f2bd4b3f15d SHA256 4eb6e0bb2c6863139d1fb4ca2d1d0f0ef07e3a85fdbb5ba98d03373f610f0c37
@@ -17,6 +18,6 @@ DIST coot-0.6-pre-1-revision-2042.tar.gz 10888679 RMD160 25fa2990351b13fb94d1a07
DIST greg-data.tar.gz 7697559 RMD160 88a726410d26528cddb8bf3946e96e12b9aad3ff SHA1 edd97b97192b6a8b5cee75f3dbed7c699deae300 SHA256 8bd662f85be7beb7d962ad005f721297c9bf63bd08ad09da1c5e5a9cefaf729f
EBUILD coot-0.5.2.ebuild 3234 RMD160 61dd2c58155350889e8120b0f7fe9361daf3aa7b SHA1 0ee99faaafc1c349569fb71342c8269732430c30 SHA256 b6a5ff0fdee3afa51befde1849cbb55bc9212067e43b88a37b3b82f9cbb10edf
EBUILD coot-0.6_pre1-r2042.ebuild 2901 RMD160 f822c42328b42dcf6a07f5ee08809d9f6e237853 SHA1 76779628a94b71d90c824ace661c22715b15075b SHA256 5ca5ea32aca7f754fa8ef8aacf3fb80eaed06545036a64f67ac4f60e0987b1da
-EBUILD coot-9999.ebuild 4594 RMD160 4b06fcefdce3ca0ae6a363146a68ce4a624664fe SHA1 02658aa64803d6df4a871a694d7cd5a43c09d972 SHA256 d3bb9ccaad6012d1cfc0a181ddacc1b7b7c5c71c513173868d3e7d28c5434b15
-MISC ChangeLog 5144 RMD160 129ba1471a138b10d1e43049bcfd5a5afefc3c7f SHA1 1ff1cbc8318010024201332b9fb38649122d6aea SHA256 0c0fb67f6b7513eeca71fda52c6d98c9b3fe72d0e7cfd49cea24e9a5a196358d
+EBUILD coot-9999.ebuild 4631 RMD160 9499a885dc981160b81ce55af3f0c6c0a3360970 SHA1 d13e787546a38043c7ac18a26e16b7c1e8cf1650 SHA256 28495ebad81d676e8daeeb2bde53221595a1e6a125b30d086dc62a9d8726b677
+MISC ChangeLog 5312 RMD160 b1f03cfc489bf3eb294e2cd574d29bd84ae925d4 SHA1 2858680000ff2708be56bb24b15c98b83c6432da SHA256 aeece602735154b9d4185d9105ad56060bdcadd90e006377bd532b954bce38a6
MISC metadata.xml 316 RMD160 845cc100ac244efa5f02595717b5da635f87d2f1 SHA1 c870d2c52c44dee3bab8623e5b6095266f400813 SHA256 64f6dbcd3bb41b26fd7897089cd60ddb93f1ea7d75f9531bca94f28b07e21b2f
diff --git a/sci-chemistry/coot/coot-9999.ebuild b/sci-chemistry/coot/coot-9999.ebuild
index cc53be8dd..c4f62b973 100644
--- a/sci-chemistry/coot/coot-9999.ebuild
+++ b/sci-chemistry/coot/coot-9999.ebuild
@@ -67,6 +67,7 @@ S="${WORKDIR}"
PATCHES=(
"${FILESDIR}"/${PV}-as-needed.patch
+ "${FILESDIR}"/${PV}-test-rama.patch
"${FILESDIR}"/link-against-guile-gtk-properly.patch
"${FILESDIR}"/fix-namespace-error.patch
)
diff --git a/sci-chemistry/coot/files/9999-test-rama.patch b/sci-chemistry/coot/files/9999-test-rama.patch
new file mode 100644
index 000000000..9693dda5e
--- /dev/null
+++ b/sci-chemistry/coot/files/9999-test-rama.patch
@@ -0,0 +1,18 @@
+Index: ligand/test-ligand.cc
+===================================================================
+--- ligand/test-ligand.cc (revision 2293)
++++ ligand/test-ligand.cc (working copy)
+@@ -324,9 +324,11 @@
+
+ void rotamer_tables() {
+
+- std::string dir = "../../coot/rama-data";
++ std::string tables_dir = COOT_DATA_DIR;
++ tables_dir += "/rama-data";
++
+ coot::rotamer_probability_tables tables;
+- tables.fill_tables(dir);
++ tables.fill_tables(tables_dir);
+
+ }
+