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author | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2010-02-06 01:40:00 +0100 |
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committer | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2010-02-07 00:55:37 +0100 |
commit | 0e05dddf2ec9df3b3db9ee3b8e7268e847e006a9 (patch) | |
tree | 323d0efd59d354c55d5bd14ece6e91f075dee57b /sci-chemistry/oasis | |
parent | InCvs (diff) | |
download | sci-0e05dddf2ec9df3b3db9ee3b8e7268e847e006a9.tar.gz sci-0e05dddf2ec9df3b3db9ee3b8e7268e847e006a9.tar.bz2 sci-0e05dddf2ec9df3b3db9ee3b8e7268e847e006a9.zip |
InCvs
Diffstat (limited to 'sci-chemistry/oasis')
-rw-r--r-- | sci-chemistry/oasis/ChangeLog | 21 | ||||
-rw-r--r-- | sci-chemistry/oasis/Manifest | 15 | ||||
-rw-r--r-- | sci-chemistry/oasis/files/4.0-makefile.patch | 15 | ||||
-rw-r--r-- | sci-chemistry/oasis/metadata.xml | 8 | ||||
-rw-r--r-- | sci-chemistry/oasis/oasis-4.0-r1.ebuild | 67 |
5 files changed, 0 insertions, 126 deletions
diff --git a/sci-chemistry/oasis/ChangeLog b/sci-chemistry/oasis/ChangeLog deleted file mode 100644 index a5e7dd5aa..000000000 --- a/sci-chemistry/oasis/ChangeLog +++ /dev/null @@ -1,21 +0,0 @@ -# ChangeLog for sci-chemistry/oasis -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - -*oasis-4.0-r1 (30 Jan 2010) - - 30 Jan 2010; Justin Lecher (jlec) <jlec@j-schmitz.net> -oasis-4.0.ebuild, - +oasis-4.0-r1.ebuild: - remove forced RDEPEND on arp-warp - RDEPEND changed sci-chemistry/ccp4 -> sci-chemistry/ccp4-apps, thanks alexxy for reporting - - 17 Nov 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> oasis-4.0.ebuild: - oasis4 USE removed again - -*oasis-4.0 (16 Nov 2009) - - 16 Nov 2009; Justin Lecher (jlec) <jlec@j-schmitz.net> - +files/4.0-makefile.patch, +oasis-4.0.ebuild, +metadata.xml: - Initial commit - Written by me - diff --git a/sci-chemistry/oasis/Manifest b/sci-chemistry/oasis/Manifest deleted file mode 100644 index 7553a08ca..000000000 --- a/sci-chemistry/oasis/Manifest +++ /dev/null @@ -1,15 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX 4.0-makefile.patch 1277 RMD160 8c5a9c6feec0bbb1e80f4a1a48fd016ffc3ad77f SHA1 6d0a3503f650cafe67d5d5b1a7c0561de20c90b5 SHA256 4bafff2ae7e58a908d7203e56643122f56c0cc0ebca8a103f2ca73fefa5986ce -DIST oasis4.0_Linux.zip 6714528 RMD160 9d5b46e06ab6b2e7e301622978056bf7b4208a79 SHA1 fab2e4556ad04556f918bae153e13a843415f0c9 SHA256 56da70ce0c2750aaddf64ad2cd7852fc341d2022209484beb356b4e73dec61ba -EBUILD oasis-4.0-r1.ebuild 1330 RMD160 a125d2b0f1740c00a909393d401666182bb2fb6f SHA1 0ed431fec96e441451063bf6b910a3043130af56 SHA256 adba9eb16134450823965316b8fff8d5398d797927e291a2ab7687e75dcd1101 -MISC ChangeLog 662 RMD160 03776fac5cc2e2cc991492a05931528682ed5497 SHA1 137f63d7091808f46cf6478f180952a563974263 SHA256 293306919c88d51cb3aabaa2c350b75de4195dcd2245541ea6515dcc4baeade1 -MISC metadata.xml 215 RMD160 bc9c07aa91f2f175542244e4e4522a73558210a1 SHA1 facb283386de1c0b6b938cdcd4dde04d1694298b SHA256 13f32353652adbd3d934d41381cfc2cacc9e1127c508cebc73806cc1026ee80c ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.11 (GNU/Linux) - -iEYEARECAAYFAktkk1gACgkQgAnW8HDreRZmGwCeMFix8f6T2tZqVAdblJP8zTQn -JuUAn0d7Z+bW4ZSl6zxehIWt7U+xnpad -=4ejx ------END PGP SIGNATURE----- diff --git a/sci-chemistry/oasis/files/4.0-makefile.patch b/sci-chemistry/oasis/files/4.0-makefile.patch deleted file mode 100644 index f27a350a1..000000000 --- a/sci-chemistry/oasis/files/4.0-makefile.patch +++ /dev/null @@ -1,15 +0,0 @@ -diff --git a/src/Makefile b/src/Makefile -index 1e9128f..eb9edaf 100644 ---- a/src/Makefile -+++ b/src/Makefile -@@ -20,8 +20,8 @@ IRIX: - @ ${F77} -O2 -mips3 -nocpp -OPT:Olimit=1500 -w -rpath ${CCP4_LIB} -o oasis4-0 oasis4-0.f -L${CCP4_LIB}/src -lccp4f -lccp4c -lmmdb -lC -lm -L/usr/lib32 -lblas - @ ${F77} -O2 -mips3 -nocpp -OPT:Olimit=1500 -w -rpath ${CCP4_LIB} -o fnp2fp fnp2fp.f -L${CCP4_LIB}/src -lccp4f -lccp4c -lmmdb -lC -lm -L/usr/lib32 -lblas - Linux: -- @ ${F77} -O -w -fno-second-underscore -fno-globals -fno-automatic -o oasis4-0 oasis4-0.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lg2c -lm -L${CCP4_LIB} -- @ ${F77} -O -w -fno-second-underscore -fno-globals -fno-automatic -o fnp2fp fnp2fp.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lg2c -lm -L${CCP4_LIB} -+ ${F77} $(CFLAGS) $(LDFLAGS) -o oasis oasis4-0.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lm -L${CCP4_LIB} -+ ${F77} $(CFLAGS) $(LDFLAGS) -o fnp2fp fnp2fp.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lm -L${CCP4_LIB} - Darwin: - @ ${F77} -O2 -fno-second-underscore -o fnp2fp fnp2fp.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lgcc_s.10.5 -lSystem -lm - @ ${F77} -O2 -fno-second-underscore -o oasis4-0 oasis4-0.f -L${CCP4_LIB} -lccp4f -lccp4c -lmmdb -lstdc++ -lgcc_s.10.5 -lSystem -lm diff --git a/sci-chemistry/oasis/metadata.xml b/sci-chemistry/oasis/metadata.xml deleted file mode 100644 index efb490d78..000000000 --- a/sci-chemistry/oasis/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci</herd> -<maintainer> - <email>sci@gentoo.org</email> -</maintainer> -</pkgmetadata> diff --git a/sci-chemistry/oasis/oasis-4.0-r1.ebuild b/sci-chemistry/oasis/oasis-4.0-r1.ebuild deleted file mode 100644 index f1ee9abea..000000000 --- a/sci-chemistry/oasis/oasis-4.0-r1.ebuild +++ /dev/null @@ -1,67 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI="2" - -inherit eutils multilib toolchain-funcs - -MY_P="${PN}${PV}_Linux" - -DESCRIPTION="A direct-method program for SAD/SIR phasing" -HOMEPAGE="http://cryst.iphy.ac.cn/Project/protein/protein-I.html" -SRC_URI="http://dev.gentooexperimental.org/~jlec/distfiles/${MY_P}.zip" - -SLOT="0" -KEYWORDS="~amd64 ~x86" -LICENSE="ccp4 oasis" -IUSE="examples" - -RDEPEND=" - sci-chemistry/ccp4-apps - sci-chemistry/pymol - sci-chemistry/solve-resolve-bin - sci-libs/ccp4-libs - sci-libs/mmdb - sci-visualization/gnuplot" -DEPEND="${RDEPEND}" - -S="${WORKDIR}"/${MY_P} - -src_prepare() { - rm bin/{fnp2fp,gnuplot,oasis4-0,seq} || die - epatch "${FILESDIR}"/${PV}-makefile.patch -} - -src_compile() { - emake \ - -C src \ - F77="$(tc-getFC)" \ - CCP4_LIB="/usr/$(get_libdir)" \ - Linux || die -} - -src_install() { - dobin src/{${PN},fnp2fp} || die - - exeinto /usr/$(get_libdir)/${PN} - doexe bin/*.*sh || die - - exeinto /usr/$(get_libdir)/${PN}/html - doexe bin/html/* || die - - if use examples; then - insinto /usr/share/${PN} - doins -r examples || die - fi - - cat >> "${T}"/25oasis <<- EOF - oasisbin="/usr/$(get_libdir)/${PN}" - EOF - - doenvd "${T}"/25oasis -} - -pkg_postinst() { - elog "For full functionality you need to emerge sci-chemistry/arp-warp-bin" -} |