Moved to tree

Signed-off-by: Justin Lecher <jlec@gentoo.org>

5 files changed, 0 insertions, 142 deletions

diff --git a/sci-chemistry/openbabel/ChangeLog b/sci-chemistry/openbabel/ChangeLog
deleted file mode 100644
index 9cddae191..000000000
--- a/sci-chemistry/openbabel/ChangeLog
+++ /dev/null
@@ -1,16 +0,0 @@
-# ChangeLog for sci-chemistry/openbabel
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
-  06 Dec 2012; Justin Lecher <jlec@gentoo.org> openbabel-2.3.2.ebuild:
-  Add missing dep for USE=doc
-
-  26 Nov 2012; Justin Lecher <jlec@gentoo.org> openbabel-2.3.2.ebuild:
-  Add test phase, check openmp correctly
-
-*openbabel-2.3.2 (19 Oct 2012)
-
-  19 Oct 2012; Reinis Danne <rei4dan@gmail.com> +openbabel-2.3.2.ebuild,
-  +files/openbabel-2.3.2-test_lib_path.patch, +metadata.xml:
-  Bump to 2.3.2.
-
diff --git a/sci-chemistry/openbabel/Manifest b/sci-chemistry/openbabel/Manifest
deleted file mode 100644
index 082e5b029..000000000
--- a/sci-chemistry/openbabel/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST openbabel-2.3.2.tar.gz 20509105 SHA256 4eaca26679aa6cc85ebf96af19191472ac63ca442c36b0427b369c3a25705188 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919 WHIRLPOOL 74eff18b73d24c8f702e5573a58ba6afba8402e9ce8782de95dc0568575a7d2d632dbc8e8a98b3cd25efdfa7379494f7dcd449342c81ddf73f42a387bce77aaa
diff --git a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch
deleted file mode 100644
index 1354f5268..000000000
--- a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch
+++ /dev/null
@@ -1,27 +0,0 @@
-diff -ru old/openbabel-2.3.0/test/CMakeLists.txt new/openbabel-2.3.0/test/CMakeLists.txt
---- old/openbabel-2.3.0/test/CMakeLists.txt	2010-10-26 17:39:01.000000000 +0300
-+++ new/openbabel-2.3.0/test/CMakeLists.txt	2010-11-14 18:13:32.000000000 +0200
-@@ -2,7 +2,7 @@
- add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"")
- 
- # define FORMATDIR for location of format plugin binaries
--add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib/\\"")
-+add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib${LIB_SUFFIX}/\\"")
- 
- ###########################################################
- #  new tests using obtest.h
-@@ -32,12 +35,12 @@ set(tests
-     uniqueid
-   )
- 
--if (EIGEN2_FOUND)
-+if(EIGEN2_FOUND OR EIGEN3_FOUND)
- set(tests
-         align
-         ${tests}
- )
--endif (EIGEN2_FOUND)
-+endif()
- 
- set(TEST_PATH ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
- 
diff --git a/sci-chemistry/openbabel/metadata.xml b/sci-chemistry/openbabel/metadata.xml
deleted file mode 100644
index aa1be0d68..000000000
--- a/sci-chemistry/openbabel/metadata.xml
+++ /dev/null
@@ -1,18 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<herd>sci-chemistry</herd>
-	<longdescription>
-    Open Babel is a chemical toolbox designed to speak the many languages of
-	chemical data. It's an open, collaborative project allowing anyone to
-	search, convert, analyze, or store data from molecular modeling, chemistry,
-	solid-state materials, biochemistry, or related areas.
-  </longdescription>
-	<use>
-		<flag name="doc">Install API documentation.</flag>
-		<flag name="openmp">Enable OpenMP support.</flag>
-		<flag name="perl">Install Perl bindings.</flag>
-		<flag name="python">Install Python bindings.</flag>
-		<flag name="wxwidgets">Build OB GUI.</flag>
-	</use>
-</pkgmetadata>
diff --git a/sci-chemistry/openbabel/openbabel-2.3.2.ebuild b/sci-chemistry/openbabel/openbabel-2.3.2.ebuild
deleted file mode 100644
index 6935e6e08..000000000
--- a/sci-chemistry/openbabel/openbabel-2.3.2.ebuild
+++ /dev/null
@@ -1,80 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-WX_GTK_VER="2.8"
-
-inherit cmake-utils eutils wxwidgets
-
-DESCRIPTION="Interconverts file formats used in molecular modeling"
-HOMEPAGE="http://openbabel.sourceforge.net/"
-SRC_URI="mirror://sourceforge/openbabel/${P}.tar.gz"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
-IUSE="doc openmp perl python test wxwidgets"
-
-RDEPEND="
-	dev-cpp/eigen:3
-	dev-libs/libxml2:2
-	!sci-chemistry/babel
-	sci-libs/inchi
-	sys-libs/zlib
-	wxwidgets? ( x11-libs/wxGTK:2.8[X] )"
-DEPEND="${RDEPEND}
-	>=dev-util/cmake-2.4.8
-	doc? ( app-doc/doxygen )"
-PDEPEND="
-	perl? ( sci-chemistry/openbabel-perl )
-	python? ( sci-chemistry/openbabel-python )"
-
-DOCS="AUTHORS ChangeLog NEWS README THANKS doc/*.inc doc/README* doc/*.mol2"
-
-PATCHES=( "${FILESDIR}"/${P}-test_lib_path.patch )
-
-pkg_setup() {
-	if use openmp; then
-		if [[ $(tc-getCC) == *gcc ]] && ! tc-has-openmp; then
-			ewarn "OpenMP is not available in your current selected gcc"
-			die "need openmp capable gcc"
-		fi
-		FORTRAN_NEED_OPENMP=1
-	fi
-}
-
-src_configure() {
-	local mycmakeargs=""
-	mycmakeargs="${mycmakeargs}
-		-DOPENBABEL_USE_SYSTEM_INCHI=ON
-		$(cmake-utils_use_enable openmp OPENMP)
-		$(cmake-utils_use wxwidgets BUILD_GUI)"
-
-	cmake-utils_src_configure
-}
-
-src_install() {
-	dohtml doc/{*.html,*.png}
-	if use doc ; then
-		insinto /usr/share/doc/${PF}/API/html
-		doins doc/API/html/*
-	fi
-
-	cmake-utils_src_install
-}
-
-src_test() {
-	local mycmakeargs=""
-	mycmakeargs="${mycmakeargs}
-		-DOPENBABEL_USE_SYSTEM_INCHI=ON
-		-DPYTHON_EXECUTABLE=false
-		$(cmake-utils_use_enable openmp OPENMP)
-		$(cmake-utils_use wxwidgets BUILD_GUI)
-		$(cmake-utils_use_enable test TESTS)"
-
-	cmake-utils_src_configure
-	cmake-utils_src_compile
-	cmake-utils_src_test -E py
-}