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| author |   je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb> | 2007-05-02 17:00:33 +0000 |
|---|---|---|
| committer | je_fro <je_fro@32389bae-6d03-0410-99cf-db05cde120eb> | 2007-05-02 17:00:33 +0000 |
| commit | 8a8f5ebac2ed962a4de1f611a891b6867a9438f2 (patch) | |
| tree | e7e7330cf7430ce334451ff342cb3f6b9b85589a /sci-chemistry/pymol/files | |
| parent | cernlib: version bump+cleaning (diff) | |
| download | sci-8a8f5ebac2ed962a4de1f611a891b6867a9438f2.tar.gz sci-8a8f5ebac2ed962a4de1f611a891b6867a9438f2.tar.bz2 sci-8a8f5ebac2ed962a4de1f611a891b6867a9438f2.zip | |
Getting rid of pymol since it's in the tree now...
git-svn-id: http://overlays.gentoo.org/svn/proj/science/overlay@589 32389bae-6d03-0410-99cf-db05cde120eb
Diffstat (limited to 'sci-chemistry/pymol/files')
| -rw-r--r-- | sci-chemistry/pymol/files/digest-pymol-0.99_rc8 | 0 | ||||
| -rw-r--r-- | sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch | 64 |
2 files changed, 0 insertions, 64 deletions
diff --git a/sci-chemistry/pymol/files/digest-pymol-0.99_rc8 b/sci-chemistry/pymol/files/digest-pymol-0.99_rc8 deleted file mode 100644 index e69de29bb..000000000 --- a/sci-chemistry/pymol/files/digest-pymol-0.99_rc8 +++ /dev/null diff --git a/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch b/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch deleted file mode 100644 index 286489ff8..000000000 --- a/sci-chemistry/pymol/files/pymol-0.99_rc8-data-path.patch +++ /dev/null @@ -1,64 +0,0 @@ ---- pymol-0.99rc8/modules/pymol/commanding.py 2007-04-18 02:11:48.000000000 -0400 -+++ commanding.py 2007-04-24 02:17:53.000000000 -0400 -@@ -129,11 +129,11 @@ - unlock(0) - r = DEFAULT_SUCCESS - if show_splash==1: # generic / open-source -- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/splash.png") -+ png_path = cmd.exp_path("$PYMOL_DATA/pymol/splash.png") - elif show_splash==2: # evaluation builds -- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/epymol.png") -+ png_path = cmd.exp_path("$PYMOL_DATA/pymol/epymol.png") - else: # incentive builds -- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/ipymol.png") -+ png_path = cmd.exp_path("$PYMOL_DATA/pymol/ipymol.png") - if os.path.exists(png_path): - cmd.do("_ cmd.load_png('%s',0,quiet=1)"%png_path) - else: ---- pymol-0.99rc8/modules/pymol/fitting.py 2007-04-18 02:11:48.000000000 -0400 -+++ fitting.py 2007-04-24 02:18:07.000000000 -0400 -@@ -61,7 +61,7 @@ - r = DEFAULT_ERROR - source = selector.process(source) - target = selector.process(target) -- mfile = cmd.exp_path("$PYMOL_PATH/data/pymol/matrices/"+matrix) -+ mfile = cmd.exp_path("$PYMOL_DATA/pymol/matrices/"+matrix) - if object==None: object='' - try: - lock() ---- pymol-0.99rc8/modules/pymol/importing.py 2007-04-18 02:11:47.000000000 -0400 -+++ importing.py 2007-04-24 02:18:46.000000000 -0400 -@@ -177,7 +177,7 @@ - r = DEFAULT_ERROR - - -- tables = { 'cmyk' : "$PYMOL_PATH/data/pymol/cmyk.png", -+ tables = { 'cmyk' : "$PYMOL_DATA/pymol/cmyk.png", - 'pymol' : 'pymol', - 'rgb' : 'rgb' } - ---- pymol-0.99rc8/modules/pymol/wizard/mutagenesis.py 2007-04-18 02:11:50.000000000 -0400 -+++ mutagenesis.py 2007-04-24 04:08:44.000000000 -0400 -@@ -35,8 +35,8 @@ - - self.dep = default_dep - -- self.ind_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_ind.pkl") -+ self.ind_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_ind.pkl") - self.load_library() - self.status = 0 # 0 no selection, 1 mutagenizing - self.bump_check = 1 -@@ -108,8 +108,8 @@ - def load_library(self): - if self.dep == 'dep': - if not hasattr(self,'dep_library'): -- self.dep_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_dep.pkl") -+ self.dep_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_dep.pkl") - - def set_mode(self,mode): - if mode in self.modes: - |