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authorJustin Lecher <jlec@gentoo.org>2011-01-21 10:41:42 +0100
committerJustin Lecher <jlec@gentoo.org>2011-01-21 10:41:42 +0100
commit3c2693728ee62ac9e4414dae82dcd3a13c0d77da (patch)
treef93b7a86719a5d350ce174ccedc991aeaf769795 /sci-chemistry
parentMerge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci (diff)
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Added missing env stuff
(Portage version: 2.2.0_alpha18/git/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/nmrpipe/ChangeLog8
-rw-r--r--sci-chemistry/nmrpipe/Manifest12
-rw-r--r--sci-chemistry/nmrpipe/files/env-nmrpipe-new10
-rw-r--r--sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r2.ebuild (renamed from sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r1.ebuild)0
4 files changed, 24 insertions, 6 deletions
diff --git a/sci-chemistry/nmrpipe/ChangeLog b/sci-chemistry/nmrpipe/ChangeLog
index a381c1ba7..5cdd3a08d 100644
--- a/sci-chemistry/nmrpipe/ChangeLog
+++ b/sci-chemistry/nmrpipe/ChangeLog
@@ -3,6 +3,14 @@
# $Header: $
<<<<<<< HEAD
+
+*nmrpipe-5.5.2011.004.17.58-r2 (21 Jan 2011)
+
+ 21 Jan 2011; Justin Lecher <jlec@gentoo.org>
+ -nmrpipe-5.5.2011.004.17.58-r1.ebuild, +nmrpipe-5.5.2011.004.17.58-r2.ebuild,
+ files/env-nmrpipe-new:
+ Added missing env stuff
+
*nmrpipe-5.5.2011.004.17.58-r1 (20 Jan 2011)
20 Jan 2011; Justin Lecher <jlec@gentoo.org>
diff --git a/sci-chemistry/nmrpipe/Manifest b/sci-chemistry/nmrpipe/Manifest
index 4ffde307b..02901e411 100644
--- a/sci-chemistry/nmrpipe/Manifest
+++ b/sci-chemistry/nmrpipe/Manifest
@@ -2,7 +2,7 @@
Hash: SHA1
AUX 5.5.2011.004.17.58-lib.patch 997 RMD160 09e9dbed8e1e2e4964bdf381a15b556d0ea9f3bb SHA1 881a3554f21fb23973e0b8a31b59cff495f5edbb SHA256 011aea3e38ef3eb650be7b5d6274913bbb4f5367838f4bb86f97556ad247b57f
-AUX env-nmrpipe-new 694 RMD160 a87684550fc63b2494002d0a3c4a6851e6aa0ba9 SHA1 8859dc802e66b4a77f9bc7aa8fa3c55d14f53c3c SHA256 9aaf105e719c166c5baf66962c218eafb7166935f0e6180f53401e2f821bea9e
+AUX env-nmrpipe-new 828 RMD160 f7a9d09f0da3c30545647dde4d935897087288b5 SHA1 f323b2d6ac2ba4a11e617154c72d1262492254ad SHA256 c67c80a74366ac9926e6940f82edd1e568eb34efeaf13bcbcd15586e87669091
DIST NMRPipeX.tZ 116738847 RMD160 48ba2231731a5b585b0c0fae9836d5069fa09d7f SHA1 598f1007f4650d9384fe968a05bfeda6ade91c41 SHA256 0d30d9a7d067eadc3c4a3d9a9176f6273bd0dd3f160a62e498718b5429f0f21e
DIST acme.tar.Z 11681951 RMD160 fdcf35fab1b63ddda55288b1b2ed0f82c8299bef SHA1 5093f92a4d7e4173bc056b6b1922a6da8e6bbf0c SHA256 5713452a1461e636f0de48e5ce3476fc0ae60b3f78a0288744f45e455f3445d9
DIST binval.com 3807 RMD160 263195035981216833da16afa4dcea568ba06303 SHA1 d90062ee85c77157e421fd684e32d59a3118c6f9 SHA256 349a6b3b3bac0f82d645a44ee6073b95b9ad9573c548367a3528d32cf0c5694e
@@ -10,13 +10,13 @@ DIST dyn.tZ 136682639 RMD160 0d6bc9fdf55bc6a8da43b1f4d0f972f36d09d2de SHA1 ea233
DIST install.com 36668 RMD160 ece053299c38a5acc892166b045f6e6aa43ce987 SHA1 39d386a06c478d4d3a5ca79cf3b5cb621114a61a SHA256 4b983b222bf2e777de2779c0d872c9ecf5f3ea13f7dc6b768b615be3b4ae1dd2
DIST talos.tZ 48960469 RMD160 d3b73c7b05f227b4c4062cca2ad5dfe7c5db5416 SHA1 04905120b4d4a10d549e07f0186abf73d3f81099 SHA256 ada4c026ea971d5f5be03611f3226a708dd48a95448ef48f694f2581685e546b
DIST valpha_all.tar 699166720 RMD160 75ebf0a84524212cd25d62ba33f6a5edca05dd20 SHA1 a8be07ac97a826e44ed240946217a50fd3e8ba1e SHA256 3f2ff243e1d0e2508f20ec1ab6108eb986bcc1bc4c9ec79b4ff8ce6584805b0a
-EBUILD nmrpipe-5.5.2011.004.17.58-r1.ebuild 5469 RMD160 40bd9d71fcae5622d867aa0a6ff27fd99e717f87 SHA1 df884ab7d786a60d154b06dd87a0f7e9febf328f SHA256 528486af2eae4a2560cb45b5638789f805685c65e0c34d22702f7c79bf0f20d5
-MISC ChangeLog 9131 RMD160 072e46d02f2cfc824f2a0b645653abfde05809ea SHA1 6ae557a05ca044ec053b7599e6409577a7764df6 SHA256 23dba537a2a91bf120d7f510d4fdb7be25fa6597beea509994fc1cea79f827c4
+EBUILD nmrpipe-5.5.2011.004.17.58-r2.ebuild 5469 RMD160 40bd9d71fcae5622d867aa0a6ff27fd99e717f87 SHA1 df884ab7d786a60d154b06dd87a0f7e9febf328f SHA256 528486af2eae4a2560cb45b5638789f805685c65e0c34d22702f7c79bf0f20d5
+MISC ChangeLog 9357 RMD160 ba37b927af4a3c4d58562bed14f0fa8a483358d8 SHA1 c6c7b9f211b9dc2438b7d12657d45c7655533861 SHA256 82850fe482276f8d4f73824015810d04b918eaced8786df1d5f808a4f37de334
MISC metadata.xml 249 RMD160 789eca813b850a4619f671586826b824098ec47b SHA1 554c0cc8335f6d6410f6f504bf032a7c6de36c89 SHA256 c3f71fe107b700acc3c21923ed360604cfd47ac3181d9ed7605a0472250a8064
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.16 (GNU/Linux)
-iEYEARECAAYFAk05T6EACgkQgAnW8HDreRa0XgCgj89rcKYj0/ndKZdYqROqs+on
-MhIAn0sevI6cPgN4ALycI19K/7xGoZEC
-=eRIB
+iEYEARECAAYFAk05VNYACgkQgAnW8HDreRaA/gCeMBu/1fcPFGd21jp/aql4WCKs
+MjEAnROkgBvtAjTghPIcdyEgPqHFwgoy
+=HHQL
-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe-new b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
index ea36901f5..91161ad40 100644
--- a/sci-chemistry/nmrpipe/files/env-nmrpipe-new
+++ b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
@@ -1,16 +1,26 @@
# Platform
+NMRCHECK="ALL"
+
BINTYPE="linux9"
NMRBINTYPE="linux9"
PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl"
# NMRPipe
NMRBASE="/opt/nmrpipe"
+NMRBIN="/opt/nmrpipe/bin"
NMRTXT="/opt/nmrpipe/nmrtxt"
MANPATH="/opt/nmrpipe/man"
+# Performance
+NMR_IO_TIMEOUT="0"
+NMR_IO_SELECT="0"
+NMR_AUTOSWAP="1"
+
+# Talos(+)
TALOS_DIR="/opt/nmrpipe/talos"
TALOSP_DIR="/opt/nmrpipe/talosplus"
+# Sparta(+)
SPARTA_DIR="/opt/nmrpipe/sparta"
SPARTAP_DIR="/opt/nmrpipe/spartaplus"
diff --git a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r1.ebuild b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r2.ebuild
index 3646f9591..3646f9591 100644
--- a/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r1.ebuild
+++ b/sci-chemistry/nmrpipe/nmrpipe-5.5.2011.004.17.58-r2.ebuild