sci-chemistry/smmp: drop dead package

Signed-off-by: Aisha Tammy <gentoo@aisha.cc>

4 files changed, 0 insertions, 149 deletions

diff --git a/sci-chemistry/smmp/Manifest b/sci-chemistry/smmp/Manifest
deleted file mode 100644
index 1b54b5bcf..000000000
--- a/sci-chemistry/smmp/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST SMMP-3.0.5.tar.bz2 233378 SHA256 70d6b719d2c2ef1d34fd9897ad1c89a37c4d7531d80c904eee39dc8855aca31c SHA512 7a6701f267fc09ee966ec34854ca12443725dc01e3bdf6283eaac7fc82764030abbc10bd0c6eefef2652bb64a70d5a09dc338448ce9d0c31021219358d40920d WHIRLPOOL 1c2b390b85ad5a9cc4f00df6838f92b8dd29403648ca1a07bf8d71b409cc396fb3671201f271a65f4fecc70a99d25ed0be95c9f26ab15d6ce431c220c9e1d991
diff --git a/sci-chemistry/smmp/files/3.0.5-flags.patch b/sci-chemistry/smmp/files/3.0.5-flags.patch
deleted file mode 100644
index 6e37fdba8..000000000
--- a/sci-chemistry/smmp/files/3.0.5-flags.patch
+++ /dev/null
@@ -1,81 +0,0 @@
-diff --git a/Makefile b/Makefile
-index adf6cda..5104567 100644
---- a/Makefile
-+++ b/Makefile
-@@ -3,15 +3,15 @@
- #.SILENT:
- 
- %_p.o : %_p.f
--	$(MPIF90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 	
- .SUFFIXES:	.o .f
- .f.o:
--	$(F90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 
- .SUFFIXES:	.o .f90
- .f90.o:
--	$(F90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 
- # ==================================== Variables for compiling and linking
- # L_FLAGS=-g
-@@ -87,11 +87,11 @@ anneal canon  outpdb  minim  regul contacts interhbond hbond
- # ============================================== Linking
- 
- $(PROG):	$(OBJ) $(SOBJ) main.o
--	$(F90) -o $(PROG) $(L_FLAGS) main.o $(OBJ) $(SOBJ)
-+	$(FC) $(LDFLAGS) $(CFLAGS) -o $(PROG) main.o $(OBJ) $(SOBJ)
- 
- # Build parallel version of SMMP.
- parallel: $(OBJ) $(POBJ) main_p.o 
--	$(MPIF90) -o $(PROG) $(L_FLAGS) main_p.o $(OBJ) $(POBJ)
-+	$(FC) $(LDFLAGS) $(CFLAGS) -o $(PROG) main_p.o $(OBJ) $(POBJ)
- 
- # Cross compile for BlueGene/P 
- bgl: BGL_L_FLAGS = -L$(BGLSYS)/lib -lmpich.rts -lfmpich.rts -lmsglayer.rts -lrts.rts -ldevices.rts -qextname=flush
-diff --git a/EXAMPLES/Makefile b/EXAMPLES/Makefile
-index e30d086..1ccf590 100644
---- a/EXAMPLES/Makefile
-+++ b/EXAMPLES/Makefile
-@@ -2,15 +2,15 @@
- 
- #.SILENT:
- %_p.o : %_p.f
--	$(MPIF90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 
- .SUFFIXES:	.o .f
- .f.o:
--	$(F90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 
- .SUFFIXES:	.o .f90
- .f90.o:
--	$(F90) $(F_FLAGS) $<
-+	$(FC) $(CFLAGS) -c $<
- 
- # ==================================== Variables for compiling and linking
- # L_FLAGS=-O0 -g
-@@ -59,16 +59,16 @@ MCOBJ = ../canon.o ../metropolis.o ../rgyr.o
- all: minimization annealing multicanonical regularization parallel_tempering_s # rootmeansquaredev
- 
- minimization:	$(BASEOBJ) $(ENOBJ) minimization.o 
--	$(F90) -o minimization $(L_FLAGS) $(BASEOBJ) $(ENOBJ) minimization.o
-+	$(F90) $(LDFLAGS) -o minimization $(BASEOBJ) $(ENOBJ) minimization.o
- 
- annealing:	$(BASEOBJ) $(MCOBJS) $(ENOBJ) annealing.o
--	$(F90) -o annealing $(L_FLAGS) $(BASEOBJ) $(MCOBJ) $(ENOBJ) ../anneal.o ../zimmer.o annealing.o
-+	$(F90) $(LDFLAGS) -o annealing $(BASEOBJ) $(MCOBJ) $(ENOBJ) ../anneal.o ../zimmer.o annealing.o
- 
- multicanonical:	$(BASEOBJ) $(MCOBJS) $(ENOBJ) multicanonical.o ../mulcan_par_mod.o 
--	$(F90) -o multicanonical $(L_FLAGS) $(BASEOBJ) $(MCOBJ) $(ENOBJ) multicanonical.o ../mulcan_par_mod.o
-+	$(F90) $(LDFLAGS) -o multicanonical $(BASEOBJ) $(MCOBJ) $(ENOBJ) multicanonical.o ../mulcan_par_mod.o
- 
- regularization:	$(BASEOBJ) $(ENOBJ) regularization.o 
--	$(F90) -o regularization $(L_FLAGS) $(BASEOBJ) $(ENOBJ) regularization.o
-+	$(F90) $(LDFLAGS) -o regularization $(BASEOBJ) $(ENOBJ) regularization.o
- 
- # rootmeansquaredev:	$(BASEOBJ) $(ENOBJ) rootmeansquaredev.o
- #	$(F90) -o rootmeansquaredev $(L_FLAGS) $(BASEOBJ) $(ENOBJ) rootmeansquaredev.o
diff --git a/sci-chemistry/smmp/metadata.xml b/sci-chemistry/smmp/metadata.xml
deleted file mode 100644
index da36ecbfc..000000000
--- a/sci-chemistry/smmp/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-chemistry@gentoo.org</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/smmp/smmp-3.0.5.ebuild b/sci-chemistry/smmp/smmp-3.0.5.ebuild
deleted file mode 100644
index a98764754..000000000
--- a/sci-chemistry/smmp/smmp-3.0.5.ebuild
+++ /dev/null
@@ -1,59 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit eutils fortran-2 python-r1 toolchain-funcs
-
-MY_PN="SMMP"
-MY_P="${MY_PN}-${PV}"
-
-DESCRIPTION="Simple Molecular Mechanics for Proteins"
-HOMEPAGE="http://smmp.berlios.de/"
-SRC_URI="mirror://berlios/${PN}/${MY_P}.tar.bz2"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc mpi test"
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="
-	${PYTHON_DEPS}
-	mpi? ( virtual/mpi )"
-DEPEND="${RDEPEND}
-	doc? ( app-doc/doxygen )"
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
-	epatch "${FILESDIR}"/${PV}-flags.patch
-}
-
-src_compile() {
-	if use mpi; then
-		FC="mpif90"
-		target="parallel"
-	else
-		target="${PN}"
-	fi
-
-	emake ${target}
-}
-
-src_test() {
-	emake examples
-	cd EXAMPLES || die
-	bash smmp.cmd || die
-}
-
-src_install() {
-	dobin ${PN}
-	python_moduleinto ${PN}
-	python_foreach_impl python_domodule *.py
-	python_foreach_impl python_optimize
-	dodoc README
-}